Difference between revisions of "TSS:Hg 233697.1"
From referenceTSS
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|RPP2= | |RPP2= | ||
|all_trans=NM_001105518:130 ENST00000367501.7:150 AK127980:192 BC030781:229 ENST00000367500.9:237 NM_017673:237 AK315802:263 AK291443:363 | |all_trans=NM_001105518:130 ENST00000367501.7:150 AK127980:192 BC030781:229 ENST00000367500.9:237 NM_017673:237 AK315802:263 AK291443:363 | ||
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=130 | |distance=130 | ||
|distance_to_tss=337 | |distance_to_tss=337 | ||
| − | |end= | + | |end=185156930 |
|end_of_center_position=185156923 | |end_of_center_position=185156923 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
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|num_trans=8 | |num_trans=8 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=185156914 |
|start_of_center_position=185156922 | |start_of_center_position=185156922 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001105518 | + | |transcript_name=NM_001105518.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233697.1 | |tss_id=hg_233697.1 | ||
Latest revision as of 11:37, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 185156922 |
|---|---|
| End of the center position in the TSS region: | 185156923 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001105518.2 |
|---|---|
| Distance: | 130 |
| Num_trans: | 8 |
| All_trans: | NM_001105518:130 ENST00000367501.7:150 AK127980:192 BC030781:229 ENST00000367500.9:237 NM_017673:237 AK315802:263 AK291443:363 |
TATA-Box annotation
| Distance to TSS: | 337 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | SWT1 RNA endoribonuclease homolog |
| Gene Alias: | D11S2243E|LP2|P2|RPP2 |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
