Difference between revisions of "TSS:Hg 233737.1"
From referenceTSS
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| Line 6: | Line 6: | ||
|NS1-BP= | |NS1-BP= | ||
|NS1BP= | |NS1BP= | ||
| − | |all_trans= | + | |all_trans=HGNC:30313 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| − | |end= | + | |end=19156830 |
|end_of_center_position=19156827 | |end_of_center_position=19156827 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=23352 |
|species=human | |species=human | ||
| − | |start= | + | |start=19156822 |
|start_of_center_position=19156826 | |start_of_center_position=19156826 | ||
|strand=- | |strand=- | ||
|transcript_name=AK056218 | |transcript_name=AK056218 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_233737.1 | |tss_id=hg_233737.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:38, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19156826 |
|---|---|
| End of the center position in the TSS region: | 19156827 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK056218 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23352 |
| All_trans: | HGNC:30313 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
