Difference between revisions of "TSS:Hg 235017.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|STE20= | |STE20= | ||
|STK3= | |STK3= | ||
| − | |all_trans= | + | |all_trans=HGNC:11551 |
| − | |chr= | + | |chr=chr14 |
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=42 | |distance=42 | ||
|distance_to_tss=-21 | |distance_to_tss=-21 | ||
| − | |end= | + | |end=105222434 |
|end_of_center_position=105222434 | |end_of_center_position=105222434 | ||
|entrez_id=8428 | |entrez_id=8428 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_003576 | |nearest_refseq=NM_003576 | ||
|nearest_unigene=Hs.508514 | |nearest_unigene=Hs.508514 | ||
| − | |num_trans= | + | |num_trans=2972 |
|species=human | |species=human | ||
| − | |start= | + | |start=105222433 |
|start_of_center_position=105222433 | |start_of_center_position=105222433 | ||
|strand=- | |strand=- | ||
Latest revision as of 12:06, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 105222433 |
|---|---|
| End of the center position in the TSS region: | 105222434 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK124665 |
|---|---|
| Distance: | 42 |
| Num_trans: | 2972 |
| All_trans: | HGNC:11551 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_003576 |
| Entrez ID: | 8428 |
| Nearest Unigene: | Hs.508514 |
| Nearest Refseq: | NM_003576 |
| Nearest Ensembl: | ENSG00000102572 |
| Gene Name: | BRF1 RNA polymerase III transcription initiation factor subunit |
| Gene Alias: | HEL-S-95|MST3|MST3B|STE20|STK3 |
| Gene Description: | serine/threonine kinase 24 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
