Difference between revisions of "TSS:Hg 236287.1"
From referenceTSS
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|SMAP-8= | |SMAP-8= | ||
|SMAP8= | |SMAP8= | ||
| − | |all_trans= | + | |all_trans=HGNC:25706 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=22 | |distance=22 | ||
|distance_to_tss=-85 | |distance_to_tss=-85 | ||
| − | |end= | + | |end=74915997 |
|end_of_center_position=74915997 | |end_of_center_position=74915997 | ||
|entrez_id=65009 | |entrez_id=65009 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020465 | |nearest_refseq=NM_020465 | ||
|nearest_unigene=Hs.322430 | |nearest_unigene=Hs.322430 | ||
| − | |num_trans= | + | |num_trans=79726 |
|species=human | |species=human | ||
| − | |start= | + | |start=74915996 |
|start_of_center_position=74915996 | |start_of_center_position=74915996 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AK091316 | |transcript_name=AK091316 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_236287.1 | |tss_id=hg_236287.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:34, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 74915996 |
|---|---|
| End of the center position in the TSS region: | 74915997 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK091316 |
|---|---|
| Distance: | 22 |
| Num_trans: | 79726 |
| All_trans: | HGNC:25706 |
TATA-Box annotation
| Distance to TSS: | -85 |
|---|---|
| Nearest PromoterID: | NM_001130487 |
| Entrez ID: | 65009 |
| Nearest Unigene: | Hs.322430 |
| Nearest Refseq: | NM_020465 |
| Nearest Ensembl: | ENSG00000103034 |
| Gene Name: | WD repeat domain 59 |
| Gene Alias: | BDM1|SMAP-8|SMAP8 |
| Gene Description: | NDRG family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
