Difference between revisions of "TSS:Hg 237099.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10919 |
| − | |chr= | + | |chr=chr18 |
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=-367 | |distance_to_tss=-367 | ||
| − | |end= | + | |end=45212995 |
|end_of_center_position=45212995 | |end_of_center_position=45212995 | ||
|entrez_id=6398 | |entrez_id=6398 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003004 | |nearest_refseq=NM_003004 | ||
|nearest_unigene=Hs.558009 | |nearest_unigene=Hs.558009 | ||
| − | |num_trans= | + | |num_trans=8170 |
|species=human | |species=human | ||
| − | |start= | + | |start=45212994 |
|start_of_center_position=45212994 | |start_of_center_position=45212994 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name=ENST00000586448.5 | + | |transcript_name=ENST00000586448.5 AK292422 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_237099.1 | |tss_id=hg_237099.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q15849 | |uniprot_id=Q15849 | ||
}} | }} | ||
Latest revision as of 12:52, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45212994 |
|---|---|
| End of the center position in the TSS region: | 45212995 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000586448.5 AK292422 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8170 |
| All_trans: | HGNC:10919 |
TATA-Box annotation
| Distance to TSS: | -367 |
|---|---|
| Nearest PromoterID: | NM_003004 |
| Entrez ID: | 6398 |
| Nearest Unigene: | Hs.558009 |
| Nearest Refseq: | NM_003004 |
| Nearest Ensembl: | ENSG00000141574 |
| Gene Name: | solute carrier family 14 member 2 |
| Gene Alias: | K12|SECTM |
| Gene Description: | secreted and transmembrane 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
