Difference between revisions of "TSS:Hg 238262.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|CTCF-T= | |CTCF-T= | ||
|HMGB1L1= | |HMGB1L1= | ||
| − | |all_trans= | + | |all_trans=HGNC:620 |
| − | |chr= | + | |chr=chr21 |
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|dJ579F20.2= | |dJ579F20.2= | ||
|distance=-6 | |distance=-6 | ||
|distance_to_tss=35741 | |distance_to_tss=35741 | ||
| − | |end= | + | |end=26170732 |
|end_of_center_position=26170732 | |end_of_center_position=26170732 | ||
|entrez_id=140690 | |entrez_id=140690 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_080618 | |nearest_refseq=NM_080618 | ||
|nearest_unigene=Hs.131543 | |nearest_unigene=Hs.131543 | ||
| − | |num_trans= | + | |num_trans=351 |
|species=human | |species=human | ||
| − | |start= | + | |start=26170731 |
|start_of_center_position=26170731 | |start_of_center_position=26170731 | ||
|strand=- | |strand=- | ||
Latest revision as of 13:18, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26170731 |
|---|---|
| End of the center position in the TSS region: | 26170732 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X06989 |
|---|---|
| Distance: | -6 |
| Num_trans: | 351 |
| All_trans: | HGNC:620 |
TATA-Box annotation
| Distance to TSS: | 35741 |
|---|---|
| Nearest PromoterID: | NM_001269041 |
| Entrez ID: | 140690 |
| Nearest Unigene: | Hs.131543 |
| Nearest Refseq: | NM_080618 |
| Nearest Ensembl: | ENSG00000124092 |
| Gene Name: | amyloid beta precursor protein |
| Gene Alias: | BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 |
| Gene Description: | CCCTC-binding factor like |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
