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Difference between revisions of "TSS:Hg 4652.1"

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{{TSSDetail
 
{{TSSDetail
 
|GEMIN3=
 
|GEMIN3=
|all_trans=BC034953:14 LF206283:16 MA441860:16 AF171063:49 ENST00000679774.1:149 ENST00000534200.2:154 ENST00000679498.1:154 ENST00000533164.6:-316 AK301697:316 ENST00000369702.5:318 NM_007204:318 ENST00000679381.1:320 ENST00000681529.1:320 ENST00000680038.1:320 ENST00000680415.1:320 ENST00000681559.1:320 ENST00000680627.1:320 ENST00000680383.1:322 BC031062:323 AK001506:323 BC011556:332 ENST00000680317.1:333 AF106019:333 ENST00000680936.1:335 AF155803:337 AK314312:339 DQ892249:340 DQ895449:340 CU679958:341 ENST00000679576.1:342 ENST00000680518.1:347 ENST00000681747.1:450
+
|all_trans=HGNC:2743
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 23: Line 23:
 
|nearest_refseq=NR_125963
 
|nearest_refseq=NR_125963
 
|nearest_unigene=Hs.715034
 
|nearest_unigene=Hs.715034
|num_trans=32
+
|num_trans=11218
 
|species=human
 
|species=human
 
|start=111755560
 
|start=111755560

Latest revision as of 23:23, 21 July 2021

Basic information about the TSS


TSS ID:hg_4652.1
Species:human
Chr:chr1
TSS Classification:yes
Start:111755560
End:111755583
Strand:+
TSS Score:1
Start of the center position in the TSS region:111755571
End of the center position in the TSS region:111755572



Gene and protein annotation


Transcript_name:BC034953
Distance:14
GeneID:11218
HGNC/MGI_ID:HGNC:2743
UniProt_ID:Q8IYV2
Gene_name:DEAD-box helicase 20
Gene_symbol:DDX20
Gene_synonyms:DP103 GEMIN3
Gene_source:HGNC:2743



Transcript annotation


Transcript_name:BC034953
Distance:14
Num_trans:11218
All_trans:HGNC:2743



TATA-Box annotation


Distance to TSS:-63
Nearest PromoterID:NR_125963
Entrez ID:101928718
Nearest Unigene:Hs.715034
Nearest Refseq:NR_125963
Nearest Ensembl:ENSG00000284830
Gene Name:DEAD-box helicase 20
Gene Alias:-
Gene Description:uncharacterized LOC101928718
Gene Type:ncRNA
CpG%:0.145
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):