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Difference between revisions of "TSS:Hg 189983.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000415997.1:0 uc061zht.1:0 ENST00000491395.5:6 uc061zhu.1:6 BC018937:-113 |chr=chr21 |cpg_percent=0.02 |distance=0 |distance_to_tss=89360 |end=260...")
 
 
(2 intermediate revisions by the same user not shown)
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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000415997.1:0 uc061zht.1:0 ENST00000491395.5:6 uc061zhu.1:6 BC018937:-113
+
|ABETA=
 +
|ABPP=
 +
|AD1=
 +
|APPI=
 +
|CTFgamma=
 +
|CVAP=
 +
|PN-II=
 +
|PN2=
 +
|all_trans=HGNC:620
 
|chr=chr21
 
|chr=chr21
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 6: Line 14:
 
|distance_to_tss=89360
 
|distance_to_tss=89360
 
|end=26051036
 
|end=26051036
 +
|end_of_center_position=26051030
 
|entrez_id=351
 
|entrez_id=351
 
|gc_percent=0.497512
 
|gc_percent=0.497512
|gene_alias=AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2
+
|gene_alias=AAA{{!}}ABETA{{!}}ABPP{{!}}AD1{{!}}APPI{{!}}CTFgamma{{!}}CVAP{{!}}PN-II{{!}}PN2{{!}}preA4
 
|gene_description=amyloid beta precursor protein
 
|gene_description=amyloid beta precursor protein
 
|gene_id=351
 
|gene_id=351
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|gene_source=HGNC:620
 
|gene_source=HGNC:620
 
|gene_symbol=APP
 
|gene_symbol=APP
|gene_synonyms=
+
|gene_synonyms=alpha-sAPP
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:620
 
|hgnc_mgi_id=HGNC:620
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|nearest_refseq=NM_000484
 
|nearest_refseq=NM_000484
 
|nearest_unigene=Hs.434980
 
|nearest_unigene=Hs.434980
|num_trans=5
+
|num_trans=351
 
|species=human
 
|species=human
 
|start=26051023
 
|start=26051023
 +
|start_of_center_position=26051029
 
|strand=-
 
|strand=-
|transcript_name=ENST00000415997.1 uc061zht.1
+
|transcript_name=ENST00000415997.1
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_189983.1
 
|tss_id=hg_189983.1

Latest revision as of 02:12, 21 July 2021

Basic information about the TSS


TSS ID:hg_189983.1
Species:human
Chr:chr21
TSS Classification:yes
Start:26051023
End:26051036
Strand:-
TSS Score:1
Start of the center position in the TSS region:26051029
End of the center position in the TSS region:26051030



Gene and protein annotation


Transcript_name:ENST00000415997.1
Distance:0
GeneID:351
HGNC/MGI_ID:HGNC:620
UniProt_ID:H7C2L2
Gene_name:amyloid beta precursor protein
Gene_symbol:APP
Gene_synonyms:alpha-sAPP
Gene_source:HGNC:620



Transcript annotation


Transcript_name:ENST00000415997.1
Distance:0
Num_trans:351
All_trans:HGNC:620



TATA-Box annotation


Distance to TSS:89360
Nearest PromoterID:NM_001136016
Entrez ID:351
Nearest Unigene:Hs.434980
Nearest Refseq:NM_000484
Nearest Ensembl:ENSG00000142192
Gene Name:amyloid beta precursor protein
Gene Alias:AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4
Gene Description:amyloid beta precursor protein
Gene Type:protein-coding
CpG%:0.02
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):