Difference between revisions of "TSS:Hg 190001.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000359726.7:0 NM_001136131:0 uc011aci.3:0 AK296229:0 NM_000484:288 NM_001136130:288 NM_001204302:288 NM_001204303:288 NM_001204301:288 NM_201414:2...") |
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |ABETA= |
+ | |ABPP= | ||
+ | |AD1= | ||
+ | |APPI= | ||
+ | |CTFgamma= | ||
+ | |CVAP= | ||
+ | |PN-II= | ||
+ | |PN2= | ||
+ | |all_trans=HGNC:620 | ||
|chr=chr21 | |chr=chr21 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
Line 6: | Line 14: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=26171133 | |end=26171133 | ||
+ | |end_of_center_position=26171121 | ||
|entrez_id=351 | |entrez_id=351 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
− | |gene_alias=AAA | + | |gene_alias=AAA{{!}}ABETA{{!}}ABPP{{!}}AD1{{!}}APPI{{!}}CTFgamma{{!}}CVAP{{!}}PN-II{{!}}PN2{{!}}preA4 |
|gene_description=amyloid beta precursor protein | |gene_description=amyloid beta precursor protein | ||
|gene_id=351 | |gene_id=351 | ||
Line 14: | Line 23: | ||
|gene_source=HGNC:620 | |gene_source=HGNC:620 | ||
|gene_symbol=APP | |gene_symbol=APP | ||
− | |gene_synonyms= | + | |gene_synonyms=alpha-sAPP |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:620 | |hgnc_mgi_id=HGNC:620 | ||
Line 21: | Line 30: | ||
|nearest_refseq=NM_000484 | |nearest_refseq=NM_000484 | ||
|nearest_unigene=Hs.434980 | |nearest_unigene=Hs.434980 | ||
− | |num_trans= | + | |num_trans=351 |
|species=human | |species=human | ||
|start=26171107 | |start=26171107 | ||
+ | |start_of_center_position=26171120 | ||
|strand=- | |strand=- | ||
− | |transcript_name=ENST00000359726.7 | + | |transcript_name=ENST00000359726.7 AK296229 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_190001.1 | |tss_id=hg_190001.1 |
Latest revision as of 02:13, 21 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 26171120 |
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End of the center position in the TSS region: | 26171121 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000359726.7 AK296229 |
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Distance: | 0 |
Num_trans: | 351 |
All_trans: | HGNC:620 |
TATA-Box annotation
Distance to TSS: | 8 |
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Nearest PromoterID: | NM_001136131 |
Entrez ID: | 351 |
Nearest Unigene: | Hs.434980 |
Nearest Refseq: | NM_000484 |
Nearest Ensembl: | ENSG00000142192 |
Gene Name: | amyloid beta precursor protein |
Gene Alias: | AAA|ABETA|ABPP|AD1|APPI|CTFgamma|CVAP|PN-II|PN2|preA4 |
Gene Description: | amyloid beta precursor protein |
Gene Type: | protein-coding |
CpG%: | 0.07 |
GC%: | 0.577114 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |