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Difference between revisions of "TSS:Hg 7246.1"

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{{TSSDetail
 
{{TSSDetail
 
|HsSwt1=
 
|HsSwt1=
|all_trans=AK127980:-4 BC030781:12 ENST00000367500.9:20 NM_017673:20 ENST00000367501.7:-46 AK315802:46 NM_001105518:-66 AK291443:146 ENST00000450350.1:335
+
|all_trans=HGNC:16785
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.07
 
|cpg_percent=0.07
Line 23: Line 23:
 
|nearest_refseq=NM_017673
 
|nearest_refseq=NM_017673
 
|nearest_unigene=Hs.134183
 
|nearest_unigene=Hs.134183
|num_trans=9
+
|num_trans=54823
 
|species=human
 
|species=human
 
|start=185157125
 
|start=185157125

Latest revision as of 08:45, 22 July 2021

Basic information about the TSS


TSS ID:hg_7246.1
Species:human
Chr:chr1
TSS Classification:yes
Start:185157125
End:185157147
Strand:+
TSS Score:1
Start of the center position in the TSS region:185157136
End of the center position in the TSS region:185157137



Gene and protein annotation


Transcript_name:AK127980
Distance:-4
GeneID:54823
HGNC/MGI_ID:HGNC:16785
UniProt_ID:B3KXU9
Gene_name:SWT1 RNA endoribonuclease homolog
Gene_symbol:SWT1
Gene_synonyms:FLJ20121 HsSwt1
Gene_source:HGNC:16785



Transcript annotation


Transcript_name:AK127980
Distance:-4
Num_trans:54823
All_trans:HGNC:16785



TATA-Box annotation


Distance to TSS:-31
Nearest PromoterID:NM_017673
Entrez ID:54823
Nearest Unigene:Hs.134183
Nearest Refseq:NM_017673
Nearest Ensembl:ENSG00000116668
Gene Name:SWT1 RNA endoribonuclease homolog
Gene Alias:C1orf26|HsSwt1
Gene Description:SWT1 RNA endoribonuclease homolog
Gene Type:protein-coding
CpG%:0.07
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):