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Difference between revisions of "TSS:Hg 82825.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000460438.5:16 KJ891126:62 EU446473:66 AB463032:66 U17163:67 LF332455:78 MA568032:78 BC106762:-238 BC106763:-238 ENST00000405358.8:246 ENST00000483075.1:-465 AB209202:-490 ENST00000430479.6:-492 ENST00000433547.1:-492 NM_004956:-492 NM_001370556:-492
+
|all_trans=HGNC:3490
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_004956
 
|nearest_refseq=NM_004956
 
|nearest_unigene=Hs.22634
 
|nearest_unigene=Hs.22634
|num_trans=16
+
|num_trans=2115
 
|species=human
 
|species=human
 
|start=13989118
 
|start=13989118

Latest revision as of 12:30, 22 July 2021

Basic information about the TSS


TSS ID:hg_82825.1
Species:human
Chr:chr7
TSS Classification:yes
Start:13989118
End:13989174
Strand:-
TSS Score:1
Start of the center position in the TSS region:13989146
End of the center position in the TSS region:13989147



Gene and protein annotation


Transcript_name:ENST00000460438.5
Distance:16
GeneID:2115
HGNC/MGI_ID:HGNC:3490
UniProt_ID:
Gene_name:ETS variant transcription factor 1
Gene_symbol:ETV1
Gene_synonyms:ER81
Gene_source:HGNC:3490



Transcript annotation


Transcript_name:ENST00000460438.5
Distance:16
Num_trans:2115
All_trans:HGNC:3490



TATA-Box annotation


Distance to TSS:520
Nearest PromoterID:NM_001370556
Entrez ID:2115
Nearest Unigene:Hs.22634
Nearest Refseq:NM_004956
Nearest Ensembl:ENSG00000006468
Gene Name:ETS variant transcription factor 1
Gene Alias:ER81
Gene Description:ETS variant 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.39801
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):