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Difference between revisions of "TSS:Hg 98091.1"

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Line 2: Line 2:
 
|CHRAC17=
 
|CHRAC17=
 
|YBL1=
 
|YBL1=
|all_trans=ENST00000288462.4:0 ENST00000374165.6:0 NM_152786:0 NM_001278630:0 NM_001278629:0 BC026884:0 AK301872:-12 BC033037:-35 AK313867:-66
+
|all_trans=HGNC:23570
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.12
 
|cpg_percent=0.12
Line 24: Line 24:
 
|nearest_refseq=NM_152786
 
|nearest_refseq=NM_152786
 
|nearest_unigene=Hs.632691
 
|nearest_unigene=Hs.632691
|num_trans=9
+
|num_trans=257169
 
|p17=
 
|p17=
 
|species=human
 
|species=human
Line 30: Line 30:
 
|start_of_center_position=113410736
 
|start_of_center_position=113410736
 
|strand=+
 
|strand=+
|transcript_name=ENST00000288462.4 ENST00000374165.6 NM_152786 NM_001278630 NM_001278629 BC026884
+
|transcript_name=ENST00000288462.4 ENST00000374165.6 BC026884
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_98091.1
 
|tss_id=hg_98091.1

Latest revision as of 18:01, 22 July 2021

Basic information about the TSS


TSS ID:hg_98091.1
Species:human
Chr:chr9
TSS Classification:yes
Start:113410720
End:113410753
Strand:+
TSS Score:1
Start of the center position in the TSS region:113410736
End of the center position in the TSS region:113410737



Gene and protein annotation


Transcript_name:ENST00000288462.4 ENST00000374165.6 BC026884
Distance:0
GeneID:257169
HGNC/MGI_ID:HGNC:23570
UniProt_ID:A0A024R879 B4DX97 Q8TAL5
Gene_name:chromosome 9 open reading frame 43
Gene_symbol:C9orf43
Gene_synonyms:MGC17358
Gene_source:HGNC:23570



Transcript annotation


Transcript_name:ENST00000288462.4 ENST00000374165.6 BC026884
Distance:0
Num_trans:257169
All_trans:HGNC:23570



TATA-Box annotation


Distance to TSS:-10
Nearest PromoterID:NM_001278630
Entrez ID:257169
Nearest Unigene:Hs.632691
Nearest Refseq:NM_152786
Nearest Ensembl:ENSG00000157653
Gene Name:chromosome 9 open reading frame 43
Gene Alias:-
Gene Description:chromosome 9 open reading frame 43
Gene Type:protein-coding
CpG%:0.12
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):