Difference between revisions of "TSS:Hg 194878.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK026547:-137 DQ600534:-317 |chr=chrM |cpg_percent=0.035 |distance=-137 |distance_to_tss=4884 |end=6561 |entrez_id= |gc_percent=0.492537 |gene_alias= |g...") |
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|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-137 | |distance=-137 | ||
| − | |distance_to_tss= | + | |distance_to_tss=959 |
|end=6561 | |end=6561 | ||
| − | |entrez_id= | + | |end_of_center_position=6555 |
| + | |entrez_id=113219467 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=microRNA 12136 |
| − | |gene_name= | + | |gene_id=107075141 |
| − | |gene_type= | + | |gene_name=MT-CO1 pseudogene 12 |
| + | |gene_source=HGNC:52014 | ||
| + | |gene_symbol=MTCO1P12 | ||
| + | |gene_synonyms= | ||
| + | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:52014 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_162149 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_162149 |
|nearest_unigene= | |nearest_unigene= | ||
|num_trans=2 | |num_trans=2 | ||
|species=human | |species=human | ||
|start=6548 | |start=6548 | ||
| + | |start_of_center_position=6554 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK026547 | |transcript_name=AK026547 | ||
| Line 24: | Line 31: | ||
|tss_id=hg_194878.1 | |tss_id=hg_194878.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 04:41, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6554 |
|---|---|
| End of the center position in the TSS region: | 6555 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK026547 |
|---|---|
| Distance: | -137 |
| Num_trans: | 2 |
| All_trans: | AK026547:-137 DQ600534:-317 |
TATA-Box annotation
| Distance to TSS: | 959 |
|---|---|
| Nearest PromoterID: | NR_162149 |
| Entrez ID: | 113219467 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_162149 |
| Nearest Ensembl: | |
| Gene Name: | MT-CO1 pseudogene 12 |
| Gene Alias: | - |
| Gene Description: | microRNA 12136 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
