Difference between revisions of "TSS:Hg 111650.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NOS-1= | ||
| + | |NOS1= | ||
| + | |SPGF12= | ||
| + | |ZC2HC12A= | ||
| + | |all_trans=HGNC:3271 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss= | + | |distance=52 |
| + | |distance_to_tss=12455 | ||
| + | |end=119042202 | ||
| + | |end_of_center_position=119042170 | ||
|entrez_id=340719 | |entrez_id=340719 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=EC_Rep1a | + | |gene_alias=EC_Rep1a{{!}}NOS-1{{!}}NOS1{{!}}SPGF12{{!}}ZC2HC12A |
|gene_description=nanos C2HC-type zinc finger 1 | |gene_description=nanos C2HC-type zinc finger 1 | ||
| − | |gene_name= | + | |gene_id=8661 |
| + | |gene_name=eukaryotic translation initiation factor 3 subunit A | ||
| + | |gene_source=HGNC:3271 | ||
| + | |gene_symbol=EIF3A | ||
| + | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3271 | ||
|nearest_ensembl=ENSG00000188613 | |nearest_ensembl=ENSG00000188613 | ||
|nearest_promoter_id=NM_199461 | |nearest_promoter_id=NM_199461 | ||
|nearest_refseq=NM_199461 | |nearest_refseq=NM_199461 | ||
|nearest_unigene=Hs.591918 | |nearest_unigene=Hs.591918 | ||
| + | |num_trans=8661 | ||
| + | |species=human | ||
| + | |start=119042136 | ||
| + | |start_of_center_position=119042169 | ||
| + | |strand=- | ||
| + | |transcript_name=BC020285 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111650.1 | |tss_id=hg_111650.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 21:46, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119042169 |
|---|---|
| End of the center position in the TSS region: | 119042170 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC020285 |
|---|---|
| Distance: | 52 |
| Num_trans: | 8661 |
| All_trans: | HGNC:3271 |
TATA-Box annotation
| Distance to TSS: | 12455 |
|---|---|
| Nearest PromoterID: | NM_199461 |
| Entrez ID: | 340719 |
| Nearest Unigene: | Hs.591918 |
| Nearest Refseq: | NM_199461 |
| Nearest Ensembl: | ENSG00000188613 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | EC_Rep1a|NOS-1|NOS1|SPGF12|ZC2HC12A |
| Gene Description: | nanos C2HC-type zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
