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Difference between revisions of "TSS:Hg 112140.1"

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(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=24 |entrez_id=93426 |gc_percent=0.671642 |gene_alias=C10orf94|CT76|POF12|SPGF15 |gene_description=synaptonemal complex central...")
 
 
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{{TSSDetail
 
{{TSSDetail
 +
|CT76=
 +
|POF12=
 +
|SPGF15=
 +
|all_trans=HGNC:28852
 +
|chr=chr10
 
|cpg_percent=0.085
 
|cpg_percent=0.085
 +
|distance=21
 
|distance_to_tss=24
 
|distance_to_tss=24
 +
|end=133565615
 +
|end_of_center_position=133565610
 
|entrez_id=93426
 
|entrez_id=93426
 
|gc_percent=0.671642
 
|gc_percent=0.671642
|gene_alias=C10orf94|CT76|POF12|SPGF15
+
|gene_alias=C10orf94{{!}}CT76{{!}}POF12{{!}}SPGF15
 
|gene_description=synaptonemal complex central element protein 1
 
|gene_description=synaptonemal complex central element protein 1
|gene_name=SYCE1
+
|gene_id=93426
 +
|gene_name=synaptonemal complex central element protein 1
 +
|gene_source=HGNC:28852
 +
|gene_symbol=SYCE1
 +
|gene_synonyms=CT76 bA108K14.6
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:28852
 
|nearest_ensembl=ENSG00000171772
 
|nearest_ensembl=ENSG00000171772
|nearest_promoter_id=NM_001143764
+
|nearest_promoter_id=NM_001143763
 
|nearest_refseq=NM_130784
 
|nearest_refseq=NM_130784
 
|nearest_unigene=Hs.553795
 
|nearest_unigene=Hs.553795
 +
|num_trans=93426
 +
|species=human
 +
|start=133565604
 +
|start_of_center_position=133565609
 +
|strand=-
 +
|transcript_name=BC034821 GQ901041
 +
|tss_classification=yes
 
|tss_id=hg_112140.1
 
|tss_id=hg_112140.1
 +
|tss_score=1
 +
|uniprot_id=Q8N0S2
 
}}
 
}}

Latest revision as of 21:56, 19 July 2021

Basic information about the TSS


TSS ID:hg_112140.1
Species:human
Chr:chr10
TSS Classification:yes
Start:133565604
End:133565615
Strand:-
TSS Score:1
Start of the center position in the TSS region:133565609
End of the center position in the TSS region:133565610



Gene and protein annotation


Transcript_name:BC034821 GQ901041
Distance:21
GeneID:93426
HGNC/MGI_ID:HGNC:28852
UniProt_ID:Q8N0S2
Gene_name:synaptonemal complex central element protein 1
Gene_symbol:SYCE1
Gene_synonyms:CT76 bA108K14.6
Gene_source:HGNC:28852



Transcript annotation


Transcript_name:BC034821 GQ901041
Distance:21
Num_trans:93426
All_trans:HGNC:28852



TATA-Box annotation


Distance to TSS:24
Nearest PromoterID:NM_001143763
Entrez ID:93426
Nearest Unigene:Hs.553795
Nearest Refseq:NM_130784
Nearest Ensembl:ENSG00000171772
Gene Name:synaptonemal complex central element protein 1
Gene Alias:C10orf94|CT76|POF12|SPGF15
Gene Description:synaptonemal complex central element protein 1
Gene Type:protein-coding
CpG%:0.085
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):