Difference between revisions of "TSS:Hg 101024.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=22 |entrez_id=55071 |gc_percent=0.746269 |gene_alias=- |gene_description=chromosome 9 open reading frame 40 |gene_name=C9orf40...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23433 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=48 | ||
| + | |end=74952901 | ||
| + | |end_of_center_position=74952865 | ||
|entrez_id=55071 | |entrez_id=55071 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 40 | |gene_description=chromosome 9 open reading frame 40 | ||
| − | |gene_name=C9orf40 | + | |gene_id=55071 |
| + | |gene_name=chromosome 9 open reading frame 40 | ||
| + | |gene_source=HGNC:23433 | ||
| + | |gene_symbol=C9orf40 | ||
| + | |gene_synonyms=FLJ10110 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23433 | ||
|nearest_ensembl=ENSG00000135045 | |nearest_ensembl=ENSG00000135045 | ||
|nearest_promoter_id=NM_017998 | |nearest_promoter_id=NM_017998 | ||
|nearest_refseq=NM_017998 | |nearest_refseq=NM_017998 | ||
|nearest_unigene=Hs.532296 | |nearest_unigene=Hs.532296 | ||
| + | |num_trans=55071 | ||
| + | |species=human | ||
| + | |start=74952827 | ||
| + | |start_of_center_position=74952864 | ||
| + | |strand=- | ||
| + | |transcript_name=AK000972 AK225349 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101024.1 | |tss_id=hg_101024.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:56, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74952864 |
|---|---|
| End of the center position in the TSS region: | 74952865 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK000972 AK225349 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55071 |
| All_trans: | HGNC:23433 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_017998 |
| Entrez ID: | 55071 |
| Nearest Unigene: | Hs.532296 |
| Nearest Refseq: | NM_017998 |
| Nearest Ensembl: | ENSG00000135045 |
| Gene Name: | chromosome 9 open reading frame 40 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 40 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
