Difference between revisions of "TSS:Hg 112265.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |LP2= | ||
| + | |P2= | ||
| + | |RPP2= | ||
| + | |all_trans=HGNC:10377 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance_to_tss=- | + | |distance=189 |
| + | |distance_to_tss=-193 | ||
| + | |end=809776 | ||
| + | |end_of_center_position=809774 | ||
|entrez_id=6181 | |entrez_id=6181 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=D11S2243E | + | |gene_alias=D11S2243E{{!}}LP2{{!}}P2{{!}}RPP2 |
|gene_description=ribosomal protein lateral stalk subunit P2 | |gene_description=ribosomal protein lateral stalk subunit P2 | ||
| − | |gene_name=RPLP2 | + | |gene_id=6181 |
| + | |gene_name=ribosomal protein lateral stalk subunit P2 | ||
| + | |gene_source=HGNC:10377 | ||
| + | |gene_symbol=RPLP2 | ||
| + | |gene_synonyms=LP2 MGC71408 P2 RPP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10377 | ||
|nearest_ensembl=ENSG00000177600 | |nearest_ensembl=ENSG00000177600 | ||
|nearest_promoter_id=NM_001004 | |nearest_promoter_id=NM_001004 | ||
|nearest_refseq=NM_001004 | |nearest_refseq=NM_001004 | ||
|nearest_unigene=Hs.437594 | |nearest_unigene=Hs.437594 | ||
| − | |tata_box= | + | |num_trans=6181 |
| + | |species=human | ||
| + | |start=809771 | ||
| + | |start_of_center_position=809773 | ||
| + | |strand=+ | ||
| + | |tata_box=-32(CGCTATAAGAGC,-,0.00) | ||
| + | |transcript_name=ENST00000532004.5 BC005354 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_112265.1 | |tss_id=hg_112265.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 21:59, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 809773 |
|---|---|
| End of the center position in the TSS region: | 809774 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000532004.5 BC005354 |
|---|---|
| Distance: | 189 |
| Num_trans: | 6181 |
| All_trans: | HGNC:10377 |
TATA-Box annotation
| Distance to TSS: | -193 |
|---|---|
| Nearest PromoterID: | NM_001004 |
| Entrez ID: | 6181 |
| Nearest Unigene: | Hs.437594 |
| Nearest Refseq: | NM_001004 |
| Nearest Ensembl: | ENSG00000177600 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | D11S2243E|LP2|P2|RPP2 |
| Gene Description: | ribosomal protein lateral stalk subunit P2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CGCTATAAGAGC,-,0.00) |
