Difference between revisions of "TSS:Mm 50619.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Pals2= | |Pals2= | ||
| − | |all_trans= | + | |all_trans=MGI:1927340 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_008016 | |nearest_refseq=NM_008016 | ||
|nearest_unigene=Mm.41288 | |nearest_unigene=Mm.41288 | ||
| − | |num_trans= | + | |num_trans=56524 |
|species=mouse | |species=mouse | ||
|start=50110837 | |start=50110837 | ||
|start_of_center_position=50110862 | |start_of_center_position=50110862 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000167628.1 | + | |transcript_name=ENSMUST00000167628.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_50619.1 | |tss_id=mm_50619.1 | ||
Latest revision as of 01:31, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 50110862 |
|---|---|
| End of the center position in the TSS region: | 50110863 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000167628.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56524 |
| All_trans: | MGI:1927340 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001361247 |
| Entrez ID: | 56524 |
| Nearest Unigene: | Mm.41288 |
| Nearest Refseq: | NM_008016 |
| Nearest Ensembl: | ENSMUSG00000038388 |
| Gene Name: | membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) |
| Gene Alias: | P55t|Pals2 |
| Gene Description: | membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
