Difference between revisions of "TSS:Mm 64391.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:96832 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_011620 | |nearest_refseq=NM_011620 | ||
|nearest_unigene=Mm.389992 | |nearest_unigene=Mm.389992 | ||
| − | |num_trans= | + | |num_trans=16985 |
|species=mouse | |species=mouse | ||
|start=142489039 | |start=142489039 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000126149.7 | |transcript_name=ENSMUST00000126149.7 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_64391.1 | |tss_id=mm_64391.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 06:38, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 142489053 |
|---|---|
| End of the center position in the TSS region: | 142489054 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000126149.7 |
|---|---|
| Distance: | -23 |
| Num_trans: | 16985 |
| All_trans: | MGI:96832 |
TATA-Box annotation
| Distance to TSS: | -9782 |
|---|---|
| Nearest PromoterID: | NM_001347552 |
| Entrez ID: | 21957 |
| Nearest Unigene: | Mm.389992 |
| Nearest Refseq: | NM_011620 |
| Nearest Ensembl: | ENSMUSG00000061723 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | fTnT |
| Gene Description: | troponin T3, skeletal, fast |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
