Difference between revisions of "TSS:Hg 225494.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000630422.2:-25 uc010teo.3:-25 AK316392:-25 NM_001111046:274 NM_001111047:274 ENST00000440264.5:347 uc010abp.4:347 AK301897:381 |chr=chr13 |cpg_pe...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:1577 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-280 | |distance_to_tss=-280 | ||
|end=36431556 | |end=36431556 | ||
| + | |end_of_center_position=36431551 | ||
|entrez_id=8900 | |entrez_id=8900 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:1577 | |hgnc_mgi_id=HGNC:1577 | ||
|nearest_ensembl=ENSG00000133101 | |nearest_ensembl=ENSG00000133101 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001111046 |
|nearest_refseq=NM_003914 | |nearest_refseq=NM_003914 | ||
|nearest_unigene=Hs.417050 | |nearest_unigene=Hs.417050 | ||
| − | |num_trans= | + | |num_trans=8900 |
|species=human | |species=human | ||
|start=36431544 | |start=36431544 | ||
| + | |start_of_center_position=36431550 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000630422.2 | + | |transcript_name=ENST00000630422.2 AK316392 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_225494.1 | |tss_id=hg_225494.1 | ||
Latest revision as of 08:44, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 36431550 |
|---|---|
| End of the center position in the TSS region: | 36431551 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000630422.2 AK316392 |
|---|---|
| Distance: | -25 |
| Num_trans: | 8900 |
| All_trans: | HGNC:1577 |
TATA-Box annotation
| Distance to TSS: | -280 |
|---|---|
| Nearest PromoterID: | NM_001111046 |
| Entrez ID: | 8900 |
| Nearest Unigene: | Hs.417050 |
| Nearest Refseq: | NM_003914 |
| Nearest Ensembl: | ENSG00000133101 |
| Gene Name: | cyclin A1 |
| Gene Alias: | CT146 |
| Gene Description: | cyclin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
