Difference between revisions of "TSS:Hg 227450.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |TDH2A= |
| + | |TPX= | ||
| + | |all_trans=HGNC:12015 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=82050 | |distance_to_tss=82050 | ||
|end=1496460 | |end=1496460 | ||
| + | |end_of_center_position=1496458 | ||
|entrez_id=7173 | |entrez_id=7173 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=MSA | + | |gene_alias=MSA{{!}}TDH2A{{!}}TPX |
|gene_description=thyroid peroxidase | |gene_description=thyroid peroxidase | ||
|gene_id=7173 | |gene_id=7173 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:12015 | |hgnc_mgi_id=HGNC:12015 | ||
|nearest_ensembl=ENSG00000115705 | |nearest_ensembl=ENSG00000115705 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175722 |
|nearest_refseq=NM_000547 | |nearest_refseq=NM_000547 | ||
|nearest_unigene=Hs.467554 | |nearest_unigene=Hs.467554 | ||
| − | |num_trans= | + | |num_trans=7173 |
|species=human | |species=human | ||
|start=1496455 | |start=1496455 | ||
| + | |start_of_center_position=1496457 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY136822 | |transcript_name=AY136822 | ||
Latest revision as of 09:25, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1496457 |
|---|---|
| End of the center position in the TSS region: | 1496458 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY136822 |
|---|---|
| Distance: | -411 |
| Num_trans: | 7173 |
| All_trans: | HGNC:12015 |
TATA-Box annotation
| Distance to TSS: | 82050 |
|---|---|
| Nearest PromoterID: | NM_175722 |
| Entrez ID: | 7173 |
| Nearest Unigene: | Hs.467554 |
| Nearest Refseq: | NM_000547 |
| Nearest Ensembl: | ENSG00000115705 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | MSA|TDH2A|TPX |
| Gene Description: | thyroid peroxidase |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
