Personal tools

Difference between revisions of "TSS:Mm 99252.1"

From referenceTSS

Jump to: navigation, search
 
Line 3: Line 3:
 
|AI503389=
 
|AI503389=
 
|Tubg=
 
|Tubg=
|all_trans=NM_134024:0 AK160125:0 BC006581:0 AK192509:3 AK183189:3 AK154019:6 AB158480:7 AK196283:75 ENSMUST00000043680.8:-170 LF198889:-172 MA434466:-172
+
|all_trans=MGI:101834
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 25: Line 25:
 
|nearest_refseq=NM_134024
 
|nearest_refseq=NM_134024
 
|nearest_unigene=Mm.479145
 
|nearest_unigene=Mm.479145
|num_trans=11
+
|num_trans=103733
 
|species=mouse
 
|species=mouse
 
|start=101120107
 
|start=101120107
 
|start_of_center_position=101120132
 
|start_of_center_position=101120132
 
|strand=+
 
|strand=+
|transcript_name=NM_134024 AK160125 BC006581
+
|transcript_name=AK160125 BC006581
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_99252.1
 
|tss_id=mm_99252.1

Latest revision as of 19:22, 28 July 2021

Basic information about the TSS


TSS ID:mm_99252.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101120107
End:101120157
Strand:+
TSS Score:1
Start of the center position in the TSS region:101120132
End of the center position in the TSS region:101120133



Gene and protein annotation


Transcript_name:AK160125 BC006581
Distance:0
GeneID:103733
HGNC/MGI_ID:MGI:101834
UniProt_ID:P83887 Q6F4J1
Gene_name:tubulin, gamma 1
Gene_symbol:Tubg1
Gene_synonyms:1500010O08Rik
Gene_source:MGI:101834



Transcript annotation


Transcript_name:AK160125 BC006581
Distance:0
Num_trans:103733
All_trans:MGI:101834



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NM_134024
Entrez ID:103733
Nearest Unigene:Mm.479145
Nearest Refseq:NM_134024
Nearest Ensembl:ENSMUSG00000035198
Gene Name:tubulin, gamma 1
Gene Alias:1500010O08Rik|AI451582|AI503389|GCP-1|Tubg
Gene Description:tubulin, gamma 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):