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Difference between revisions of "TSS:Mm 99294.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|VAP1=
 
|VAP1=
|all_trans=AF115411:-88 BC080857:-97 ENSMUST00000017316.6:195 AK040729:195 NM_009675:-258 ENSMUST00000103105.9:-259 AF054831:-259 LF198894:-260 MA434471:-260
+
|all_trans=MGI:1306797
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 23: Line 23:
 
|nearest_refseq=NM_009675
 
|nearest_refseq=NM_009675
 
|nearest_unigene=Mm.67281
 
|nearest_unigene=Mm.67281
|num_trans=9
+
|num_trans=11754
 
|species=mouse
 
|species=mouse
 
|start=101330863
 
|start=101330863

Latest revision as of 19:23, 28 July 2021

Basic information about the TSS


TSS ID:mm_99294.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:101330863
End:101330874
Strand:+
TSS Score:1
Start of the center position in the TSS region:101330868
End of the center position in the TSS region:101330869



Gene and protein annotation


Transcript_name:AF115411
Distance:-88
GeneID:11754
HGNC/MGI_ID:MGI:1306797
UniProt_ID:
Gene_name:amine oxidase, copper containing 3
Gene_symbol:Aoc3
Gene_synonyms:SSAO VAP1 semicarbazide-sensitive_amine_oxidase
Gene_source:MGI:1306797



Transcript annotation


Transcript_name:AF115411
Distance:-88
Num_trans:11754
All_trans:MGI:1306797



TATA-Box annotation


Distance to TSS:263
Nearest PromoterID:NM_009675
Entrez ID:11754
Nearest Unigene:Mm.67281
Nearest Refseq:NM_009675
Nearest Ensembl:ENSMUSG00000019326
Gene Name:amine oxidase, copper containing 3
Gene Alias:SSAO|VAP1
Gene Description:amine oxidase, copper containing 3
Gene Type:protein-coding
CpG%:0.015
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):