Personal tools

Difference between revisions of "TSS:Mm 99554.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK018891:-8 NR_131109:-43 NR_131143:-43
+
|all_trans=MGI:1925879
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_131109
 
|nearest_refseq=NR_131109
 
|nearest_unigene=Mm.398236
 
|nearest_unigene=Mm.398236
|num_trans=3
+
|num_trans=78629
 
|species=mouse
 
|species=mouse
 
|start=103638978
 
|start=103638978

Latest revision as of 19:28, 28 July 2021

Basic information about the TSS


TSS ID:mm_99554.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:103638978
End:103638985
Strand:+
TSS Score:1
Start of the center position in the TSS region:103638981
End of the center position in the TSS region:103638982



Gene and protein annotation


Transcript_name:AK018891
Distance:-8
GeneID:78629
HGNC/MGI_ID:MGI:1925879
UniProt_ID:
Gene_name:RIKEN cDNA 1700072I22 gene
Gene_symbol:1700072I22Rik
Gene_synonyms:
Gene_source:MGI:1925879



Transcript annotation


Transcript_name:AK018891
Distance:-8
Num_trans:78629
All_trans:MGI:1925879



TATA-Box annotation


Distance to TSS:46
Nearest PromoterID:NR_131143
Entrez ID:78629
Nearest Unigene:Mm.398236
Nearest Refseq:NR_131109
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700072I22 gene
Gene Alias:-
Gene Description:RIKEN cDNA 1700072I22 gene
Gene Type:ncRNA
CpG%:0.01
GC%:0.492537
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):