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Difference between revisions of "TSS:Mm 99714.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000021049.8:0 ENSMUST00000133131.1:0 AK012294:0 KY499681:0 BC030840:0 AK010505:0 AK135451:4 AK145703:9 NM_008950:13 Z54219:13
+
|all_trans=MGI:105047
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 22: Line 22:
 
|nearest_refseq=NM_008950
 
|nearest_refseq=NM_008950
 
|nearest_unigene=Mm.272361
 
|nearest_unigene=Mm.272361
|num_trans=10
+
|num_trans=19184
 
|species=mouse
 
|species=mouse
 
|start=106256140
 
|start=106256140

Latest revision as of 19:32, 28 July 2021

Basic information about the TSS


TSS ID:mm_99714.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:106256140
End:106256172
Strand:+
TSS Score:1
Start of the center position in the TSS region:106256156
End of the center position in the TSS region:106256157



Gene and protein annotation


Transcript_name:ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 KY499681 BC030840 AK010505
Distance:0
GeneID:19184
HGNC/MGI_ID:MGI:105047
UniProt_ID:A0A1S6GWH1 P62196 Q8K1K2
Gene_name:protease (prosome, macropain) 26S subunit, ATPase 5
Gene_symbol:Psmc5
Gene_synonyms:Rpt6 mSUG1
Gene_source:MGI:105047



Transcript annotation


Transcript_name:ENSMUST00000021049.8 ENSMUST00000133131.1 AK012294 KY499681 BC030840 AK010505
Distance:0
Num_trans:19184
All_trans:MGI:105047



TATA-Box annotation


Distance to TSS:-29
Nearest PromoterID:NM_008950
Entrez ID:19184
Nearest Unigene:Mm.272361
Nearest Refseq:NM_008950
Nearest Ensembl:ENSMUSG00000020708
Gene Name:protease (prosome, macropain) 26S subunit, ATPase 5
Gene Alias:Rpt6|mSUG1
Gene Description:protease (prosome, macropain) 26S subunit, ATPase 5
Gene Type:protein-coding
CpG%:0.09
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):