Difference between revisions of "TSS:Hg 100471.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GIL= | |GIL= | ||
| − | |all_trans= | + | |all_trans=HGNC:636 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004925 | |nearest_refseq=NM_004925 | ||
|nearest_unigene=Hs.234642 | |nearest_unigene=Hs.234642 | ||
| − | |num_trans= | + | |num_trans=360 |
|species=human | |species=human | ||
|start=33447586 | |start=33447586 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=-34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) | |tata_box=-34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) | ||
| − | |transcript_name=ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 | + | |transcript_name=ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 AK095363 AK292208 AK315760 AK303206 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100471.1 | |tss_id=hg_100471.1 | ||
Latest revision as of 17:44, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 33447594 |
|---|---|
| End of the center position in the TSS region: | 33447595 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000493581.1 ENST00000297991.6 ENST00000643650.1 AK095363 AK292208 AK315760 AK303206 |
|---|---|
| Distance: | 0 |
| Num_trans: | 360 |
| All_trans: | HGNC:636 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001318144 |
| Entrez ID: | 360 |
| Nearest Unigene: | Hs.234642 |
| Nearest Refseq: | NM_004925 |
| Nearest Ensembl: | ENSG00000165272 |
| Gene Name: | aquaporin 3 (Gill blood group) |
| Gene Alias: | AQP-3|GIL |
| Gene Description: | aquaporin 3 (Gill blood group) |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TCCTATAAAGGG,+,0.00),-34(TCCTATAAAGGG,-,0.00) |
