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Difference between revisions of "TSS:Hg 232488.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000360059.5:74 AK301721:83 AK302219:-131 BC033784:-133 AF325353:-152 KJ898511:-155 ENST00000491635.1:-170 AK097093:-170 AK295231:-170 AK001548:-170 AK222861:-170 BC038975:-173 AF120334:-175 BC021243:-182 BC008683:-185 ENST00000360803.9:-198 NM_012341:-198 AK001552:-223
+
|all_trans=HGNC:21535
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.065
 
|cpg_percent=0.065
Line 22: Line 22:
 
|nearest_refseq=NM_032900
 
|nearest_refseq=NM_032900
 
|nearest_unigene=Hs.80305
 
|nearest_unigene=Hs.80305
|num_trans=18
+
|num_trans=23560
 
|species=human
 
|species=human
 
|start=988631
 
|start=988631

Latest revision as of 11:11, 21 July 2021

Basic information about the TSS


TSS ID:hg_232488.1
Species:human
Chr:chr10
TSS Classification:yes
Start:988631
End:988632
Strand:+
TSS Score:1
Start of the center position in the TSS region:988631
End of the center position in the TSS region:988632



Gene and protein annotation


Transcript_name:ENST00000360059.5
Distance:74
GeneID:23560
HGNC/MGI_ID:HGNC:21535
UniProt_ID:Q5T3R7
Gene_name:GTP binding protein 4
Gene_symbol:GTPBP4
Gene_synonyms:CRFG FLJ10686 FLJ10690 NGB NOG1
Gene_source:HGNC:21535



Transcript annotation


Transcript_name:ENST00000360059.5
Distance:74
Num_trans:23560
All_trans:HGNC:21535



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NM_032900
Entrez ID:84986
Nearest Unigene:Hs.80305
Nearest Refseq:NM_032900
Nearest Ensembl:ENSG00000213390
Gene Name:GTP binding protein 4
Gene Alias:-
Gene Description:Rho GTPase activating protein 19
Gene Type:protein-coding
CpG%:0.065
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):