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Difference between revisions of "TSS:Hg 233698.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000367501.7:9 NM_001105518:-11 AK127980:51 BC030781:88 ENST00000367500.9:96 NM_017673:96 AK315802:122 AK291443:222 ENST00000450350.1:411
+
|all_trans=HGNC:16785
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NR_120570
 
|nearest_refseq=NR_120570
 
|nearest_unigene=Hs.547927
 
|nearest_unigene=Hs.547927
|num_trans=9
+
|num_trans=54823
 
|species=human
 
|species=human
 
|start=185157070
 
|start=185157070

Latest revision as of 11:37, 21 July 2021

Basic information about the TSS


TSS ID:hg_233698.1
Species:human
Chr:chr1
TSS Classification:yes
Start:185157070
End:185157071
Strand:+
TSS Score:1
Start of the center position in the TSS region:185157070
End of the center position in the TSS region:185157071



Gene and protein annotation


Transcript_name:ENST00000367501.7
Distance:9
GeneID:54823
HGNC/MGI_ID:HGNC:16785
UniProt_ID:Q5T5J6
Gene_name:SWT1 RNA endoribonuclease homolog
Gene_symbol:SWT1
Gene_synonyms:FLJ20121 HsSwt1
Gene_source:HGNC:16785



Transcript annotation


Transcript_name:ENST00000367501.7
Distance:9
Num_trans:54823
All_trans:HGNC:16785



TATA-Box annotation


Distance to TSS:-317570
Nearest PromoterID:NR_120570
Entrez ID:101928944
Nearest Unigene:Hs.547927
Nearest Refseq:NR_120570
Nearest Ensembl:ENSG00000255178
Gene Name:SWT1 RNA endoribonuclease homolog
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 2720
Gene Type:ncRNA
CpG%:0.01
GC%:0.308458
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):