Difference between revisions of "TSS:Hg 234832.1"
From referenceTSS
| Line 4: | Line 4: | ||
|IB= | |IB= | ||
|ML-1= | |ML-1= | ||
| − | |all_trans= | + | |all_trans=HGNC:1577 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=87 |
|distance_to_tss=307 | |distance_to_tss=307 | ||
|end=36431816 | |end=36431816 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_016529 | |nearest_refseq=NM_016529 | ||
|nearest_unigene=Hs.444957 | |nearest_unigene=Hs.444957 | ||
| − | |num_trans= | + | |num_trans=8900 |
|species=human | |species=human | ||
|start=36431815 | |start=36431815 | ||
| Line 32: | Line 32: | ||
|strand=+ | |strand=+ | ||
|tata_box=-84(GGCTATAAGAAG,-,0.00) | |tata_box=-84(GGCTATAAGAAG,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=ENST00000440264.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_234832.1 | |tss_id=hg_234832.1 | ||
Latest revision as of 12:02, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36431815 |
|---|---|
| End of the center position in the TSS region: | 36431816 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000440264.5 |
|---|---|
| Distance: | 87 |
| Num_trans: | 8900 |
| All_trans: | HGNC:1577 |
TATA-Box annotation
| Distance to TSS: | 307 |
|---|---|
| Nearest PromoterID: | NM_001313741 |
| Entrez ID: | 51761 |
| Nearest Unigene: | Hs.444957 |
| Nearest Refseq: | NM_016529 |
| Nearest Ensembl: | ENSG00000132932 |
| Gene Name: | cyclin A1 |
| Gene Alias: | ATP|ATPIB|CAMRQ4|IB|ML-1 |
| Gene Description: | ATPase phospholipid transporting 8A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -84(GGCTATAAGAAG,-,0.00) |
