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Difference between revisions of "TSS:Hg 240485.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000514000.5:-62 AF193052:-74 BC012125:-99 ENST00000356736.5:-107 ENST00000512657.5:-107 NM_001135146:-107 NM_001135147:122 ENST00000424970.6:170 AK304274:170 NM_022154:184 ENST00000394833.6:236 AB040120:236
+
|all_trans=HGNC:20862
 
|chr=chr4
 
|chr=chr4
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NR_136185
 
|nearest_refseq=NR_136185
 
|nearest_unigene=Hs.655175
 
|nearest_unigene=Hs.655175
|num_trans=12
+
|num_trans=64116
 
|species=human
 
|species=human
 
|start=102345374
 
|start=102345374

Latest revision as of 14:05, 21 July 2021

Basic information about the TSS


TSS ID:hg_240485.1
Species:human
Chr:chr4
TSS Classification:yes
Start:102345374
End:102345375
Strand:-
TSS Score:1
Start of the center position in the TSS region:102345374
End of the center position in the TSS region:102345375



Gene and protein annotation


Transcript_name:ENST00000514000.5
Distance:-62
GeneID:64116
HGNC/MGI_ID:HGNC:20862
UniProt_ID:
Gene_name:solute carrier family 39 member 8
Gene_symbol:SLC39A8
Gene_synonyms:BIGM103
Gene_source:HGNC:20862



Transcript annotation


Transcript_name:ENST00000514000.5
Distance:-62
Num_trans:64116
All_trans:HGNC:20862



TATA-Box annotation


Distance to TSS:27824
Nearest PromoterID:NR_136185
Entrez ID:105374297
Nearest Unigene:Hs.655175
Nearest Refseq:NR_136185
Nearest Ensembl:
Gene Name:solute carrier family 39 member 8
Gene Alias:-
Gene Description:uncharacterized LOC105374297
Gene Type:ncRNA
CpG%:0.015
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):