Difference between revisions of "TSS:Hg 232057.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY153483:-15 ENST00000554172.2:-17 uc057vks.1:-17 |chr=chr10 |cpg_percent=0.095 |distance=-15 |distance_to_tss=3156 |end=100748867 |entrez_id=5076 |gc_p...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |PAPRS= |
| + | |all_trans=HGNC:8616 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=3156 | |distance_to_tss=3156 | ||
|end=100748867 | |end=100748867 | ||
| + | |end_of_center_position=100748867 | ||
|entrez_id=5076 | |entrez_id=5076 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=FSGS7 | + | |gene_alias=FSGS7{{!}}PAPRS |
|gene_description=paired box 2 | |gene_description=paired box 2 | ||
|gene_id=5076 | |gene_id=5076 | ||
| Line 18: | Line 20: | ||
|hgnc_mgi_id=HGNC:8616 | |hgnc_mgi_id=HGNC:8616 | ||
|nearest_ensembl=ENSG00000075891 | |nearest_ensembl=ENSG00000075891 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_003987 |
|nearest_refseq=NM_000278 | |nearest_refseq=NM_000278 | ||
|nearest_unigene=Hs.155644 | |nearest_unigene=Hs.155644 | ||
| − | |num_trans= | + | |num_trans=5076 |
|species=human | |species=human | ||
|start=100748866 | |start=100748866 | ||
| + | |start_of_center_position=100748866 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY153483 | |transcript_name=AY153483 | ||
Latest revision as of 11:02, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100748866 |
|---|---|
| End of the center position in the TSS region: | 100748867 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY153483 |
|---|---|
| Distance: | -15 |
| Num_trans: | 5076 |
| All_trans: | HGNC:8616 |
TATA-Box annotation
| Distance to TSS: | 3156 |
|---|---|
| Nearest PromoterID: | NM_003987 |
| Entrez ID: | 5076 |
| Nearest Unigene: | Hs.155644 |
| Nearest Refseq: | NM_000278 |
| Nearest Ensembl: | ENSG00000075891 |
| Gene Name: | paired box 2 |
| Gene Alias: | FSGS7|PAPRS |
| Gene Description: | paired box 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
