Difference between revisions of "TSS:Hg 232350.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=CU677334:9 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=9 |
|distance_to_tss=687 | |distance_to_tss=687 | ||
| − | |end= | + | |end=69104145 |
| + | |end_of_center_position=69104137 | ||
|entrez_id=219736 | |entrez_id=219736 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| Line 11: | Line 12: | ||
|gene_description=storkhead box 1 | |gene_description=storkhead box 1 | ||
|gene_id=219736 | |gene_id=219736 | ||
| − | |gene_name= | + | |gene_name=STOX1 |
|gene_source=HGNC:23508 | |gene_source=HGNC:23508 | ||
|gene_symbol=STOX1 | |gene_symbol=STOX1 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:23508 | |hgnc_mgi_id=HGNC:23508 | ||
|nearest_ensembl=ENSG00000165730 | |nearest_ensembl=ENSG00000165730 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001130160 |
|nearest_refseq=NM_152709 | |nearest_refseq=NM_152709 | ||
|nearest_unigene=Hs.37636 | |nearest_unigene=Hs.37636 | ||
|num_trans=1 | |num_trans=1 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=69104127 |
| − | |strand= | + | |start_of_center_position=69104136 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=CU677334 |
| + | |tss_classification=no | ||
|tss_id=hg_232350.1 | |tss_id=hg_232350.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 08:35, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 69104136 |
|---|---|
| End of the center position in the TSS region: | 69104137 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CU677334 |
|---|---|
| Distance: | 9 |
| Num_trans: | 1 |
| All_trans: | CU677334:9 |
TATA-Box annotation
| Distance to TSS: | 687 |
|---|---|
| Nearest PromoterID: | NM_001130160 |
| Entrez ID: | 219736 |
| Nearest Unigene: | Hs.37636 |
| Nearest Refseq: | NM_152709 |
| Nearest Ensembl: | ENSG00000165730 |
| Gene Name: | STOX1 |
| Gene Alias: | C10orf24 |
| Gene Description: | storkhead box 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
