Difference between revisions of "TSS:Hg 232351.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=CU674121:-186 |chr=chr10 |cpg_percent=0.04 |distance=-186 |distance_to_tss=-9683 |end=68946443 |entrez_id=9188 |gc_percent=0.517413 |gene_alias=GUA|GURD...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GURDB= |
| + | |RH-II/GU= | ||
| + | |RH-II/GuA= | ||
| + | |all_trans=HGNC:14453 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=62 |
| − | |distance_to_tss=- | + | |distance_to_tss=-9730 |
| − | |end= | + | |end=70052482 |
| + | |end_of_center_position=70052482 | ||
|entrez_id=9188 | |entrez_id=9188 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=GUA | + | |gene_alias=GUA{{!}}GURDB{{!}}RH-II/GU{{!}}RH-II/GuA |
|gene_description=DExD-box helicase 21 | |gene_description=DExD-box helicase 21 | ||
| − | |gene_name= | + | |gene_id=55506 |
| + | |gene_name=macroH2A.2 histone | ||
| + | |gene_source=HGNC:14453 | ||
| + | |gene_symbol=MACROH2A2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14453 | ||
|nearest_ensembl=ENSG00000165732 | |nearest_ensembl=ENSG00000165732 | ||
|nearest_promoter_id=NM_004728 | |nearest_promoter_id=NM_004728 | ||
|nearest_refseq=NM_004728 | |nearest_refseq=NM_004728 | ||
|nearest_unigene=Hs.223141 | |nearest_unigene=Hs.223141 | ||
| − | |num_trans= | + | |num_trans=55506 |
|species=human | |species=human | ||
| − | |start= | + | |start=70052481 |
| − | |strand= | + | |start_of_center_position=70052481 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000677255.1 |
| + | |tss_classification=yes | ||
|tss_id=hg_232351.1 | |tss_id=hg_232351.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:08, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70052481 |
|---|---|
| End of the center position in the TSS region: | 70052482 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000677255.1 |
|---|---|
| Distance: | 62 |
| Num_trans: | 55506 |
| All_trans: | HGNC:14453 |
TATA-Box annotation
| Distance to TSS: | -9730 |
|---|---|
| Nearest PromoterID: | NM_004728 |
| Entrez ID: | 9188 |
| Nearest Unigene: | Hs.223141 |
| Nearest Refseq: | NM_004728 |
| Nearest Ensembl: | ENSG00000165732 |
| Gene Name: | macroH2A.2 histone |
| Gene Alias: | GUA|GURDB|RH-II/GU|RH-II/GuA |
| Gene Description: | DExD-box helicase 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
