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Difference between revisions of "TSS:Hg 233180.1"

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(Created page with "{{TSSDetail |all_trans=NM_001010846:15 NR_135169:15 BC117210:15 BC143765:16 ENST00000304760.2:-48 uc001ffb.4:-48 |chr=chr1 |cpg_percent=0.14 |distance=15 |distance_to_tss=-15...")
 
 
(3 intermediate revisions by the same user not shown)
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{{TSSDetail
 
{{TSSDetail
|all_trans=NM_001010846:15 NR_135169:15 BC117210:15 BC143765:16 ENST00000304760.2:-48 uc001ffb.4:-48
+
|all_trans=HGNC:29678
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.14
 
|cpg_percent=0.14
|distance=15
+
|distance=1
|distance_to_tss=-15
+
|distance_to_tss=-154
|end=154502065
+
|end=155610224
|entrez_id=126669
+
|end_of_center_position=155610224
 +
|entrez_id=126668
 
|gc_percent=0.78607
 
|gc_percent=0.78607
 
|gene_alias=-
 
|gene_alias=-
|gene_description=Src homology 2 domain containing E
+
|gene_description=tudor domain containing 10
|gene_id=126669
+
|gene_id=55154
|gene_name=Src homology 2 domain containing E
+
|gene_name=misato mitochondrial distribution and morphology regulator 1
|gene_source=HGNC:27004
+
|gene_source=HGNC:29678
|gene_symbol=SHE
+
|gene_symbol=MSTO1
|gene_synonyms=
+
|gene_synonyms=FLJ10504 LST005 MST misato
 
|gene_type=protein-coding
 
|gene_type=protein-coding
|hgnc_mgi_id=HGNC:27004
+
|hgnc_mgi_id=HGNC:29678
|nearest_ensembl=ENSG00000169291
+
|nearest_ensembl=ENSG00000163239
|nearest_promoter_id=NM_001010846
+
|nearest_promoter_id=NM_182499
|nearest_refseq=NM_001010846
+
|nearest_refseq=NM_182499
|nearest_unigene=Hs.591481
+
|nearest_unigene=Hs.387671
|num_trans=6
+
|num_trans=55154
 
|species=human
 
|species=human
|start=154502064
+
|start=155610222
|strand=-
+
|start_of_center_position=155610223
|transcript_name=NM_001010846 NR_135169 BC117210
+
|strand=+
 +
|transcript_name=BC002535
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_233180.1
 
|tss_id=hg_233180.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=Q5VZ18
+
|uniprot_id=
 
}}
 
}}

Latest revision as of 11:26, 21 July 2021

Basic information about the TSS


TSS ID:hg_233180.1
Species:human
Chr:chr1
TSS Classification:yes
Start:155610222
End:155610224
Strand:+
TSS Score:1
Start of the center position in the TSS region:155610223
End of the center position in the TSS region:155610224



Gene and protein annotation


Transcript_name:BC002535
Distance:1
GeneID:55154
HGNC/MGI_ID:HGNC:29678
UniProt_ID:
Gene_name:misato mitochondrial distribution and morphology regulator 1
Gene_symbol:MSTO1
Gene_synonyms:FLJ10504 LST005 MST misato
Gene_source:HGNC:29678



Transcript annotation


Transcript_name:BC002535
Distance:1
Num_trans:55154
All_trans:HGNC:29678



TATA-Box annotation


Distance to TSS:-154
Nearest PromoterID:NM_182499
Entrez ID:126668
Nearest Unigene:Hs.387671
Nearest Refseq:NM_182499
Nearest Ensembl:ENSG00000163239
Gene Name:misato mitochondrial distribution and morphology regulator 1
Gene Alias:-
Gene Description:tudor domain containing 10
Gene Type:protein-coding
CpG%:0.14
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):