Difference between revisions of "TSS:Hg 233180.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001010846:15 NR_135169:15 BC117210:15 BC143765:16 ENST00000304760.2:-48 uc001ffb.4:-48 |chr=chr1 |cpg_percent=0.14 |distance=15 |distance_to_tss=-15...") |
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans= | + | |all_trans=HGNC:29678 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
− | |distance= | + | |distance=1 |
− | |distance_to_tss=- | + | |distance_to_tss=-154 |
− | |end= | + | |end=155610224 |
− | |entrez_id= | + | |end_of_center_position=155610224 |
+ | |entrez_id=126668 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=- | |gene_alias=- | ||
− | |gene_description= | + | |gene_description=tudor domain containing 10 |
− | |gene_id= | + | |gene_id=55154 |
− | |gene_name= | + | |gene_name=misato mitochondrial distribution and morphology regulator 1 |
− | |gene_source=HGNC: | + | |gene_source=HGNC:29678 |
− | |gene_symbol= | + | |gene_symbol=MSTO1 |
− | |gene_synonyms= | + | |gene_synonyms=FLJ10504 LST005 MST misato |
|gene_type=protein-coding | |gene_type=protein-coding | ||
− | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:29678 |
− | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000163239 |
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182499 |
− | |nearest_refseq= | + | |nearest_refseq=NM_182499 |
− | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.387671 |
− | |num_trans= | + | |num_trans=55154 |
|species=human | |species=human | ||
− | |start= | + | |start=155610222 |
− | |strand= | + | |start_of_center_position=155610223 |
− | |transcript_name= | + | |strand=+ |
+ | |transcript_name=BC002535 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233180.1 | |tss_id=hg_233180.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id= | + | |uniprot_id= |
}} | }} |
Latest revision as of 11:26, 21 July 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 155610223 |
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End of the center position in the TSS region: | 155610224 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC002535 |
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Distance: | 1 |
Num_trans: | 55154 |
All_trans: | HGNC:29678 |
TATA-Box annotation
Distance to TSS: | -154 |
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Nearest PromoterID: | NM_182499 |
Entrez ID: | 126668 |
Nearest Unigene: | Hs.387671 |
Nearest Refseq: | NM_182499 |
Nearest Ensembl: | ENSG00000163239 |
Gene Name: | misato mitochondrial distribution and morphology regulator 1 |
Gene Alias: | - |
Gene Description: | tudor domain containing 10 |
Gene Type: | protein-coding |
CpG%: | 0.14 |
GC%: | 0.78607 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |