Difference between revisions of "TSS:Hg 233664.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000436351.2:7 uc057yqh.1:7 NM_016229:179 NR_126508:179 ENST00000299498.10:276 uc001mfm.4:276 AF169802:276 ENST00000524790.5:305 uc057ypx.1:305 BC0...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10377 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=-26 |
| − | |distance_to_tss=- | + | |distance_to_tss=-277 |
| − | |end= | + | |end=810314 |
| + | |end_of_center_position=810305 | ||
|entrez_id=51700 | |entrez_id=51700 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=B5R.2 | |gene_alias=B5R.2 | ||
|gene_description=cytochrome b5 reductase 2 | |gene_description=cytochrome b5 reductase 2 | ||
| − | |gene_id= | + | |gene_id=6181 |
| − | |gene_name= | + | |gene_name=ribosomal protein lateral stalk subunit P2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10377 |
| − | |gene_symbol= | + | |gene_symbol=RPLP2 |
| − | |gene_synonyms= | + | |gene_synonyms=LP2 MGC71408 P2 RPP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10377 |
|nearest_ensembl=ENSG00000166394 | |nearest_ensembl=ENSG00000166394 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016229 |
|nearest_refseq=NM_016229 | |nearest_refseq=NM_016229 | ||
|nearest_unigene=Hs.414362 | |nearest_unigene=Hs.414362 | ||
| − | |num_trans= | + | |num_trans=6181 |
|species=human | |species=human | ||
| − | |start= | + | |start=810294 |
| − | |strand= | + | |start_of_center_position=810304 |
| − | |tata_box= | + | |strand=+ |
| − | |transcript_name= | + | |tata_box=77(GTGTATTTATGG,-,0.00) |
| + | |transcript_name=ENST00000530398.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233664.1 | |tss_id=hg_233664.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=H0YDD8 |
}} | }} | ||
Latest revision as of 11:37, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 810304 |
|---|---|
| End of the center position in the TSS region: | 810305 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000530398.1 |
|---|---|
| Distance: | -26 |
| Num_trans: | 6181 |
| All_trans: | HGNC:10377 |
TATA-Box annotation
| Distance to TSS: | -277 |
|---|---|
| Nearest PromoterID: | NM_016229 |
| Entrez ID: | 51700 |
| Nearest Unigene: | Hs.414362 |
| Nearest Refseq: | NM_016229 |
| Nearest Ensembl: | ENSG00000166394 |
| Gene Name: | ribosomal protein lateral stalk subunit P2 |
| Gene Alias: | B5R.2 |
| Gene Description: | cytochrome b5 reductase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 77(GTGTATTTATGG,-,0.00) |
