Difference between revisions of "TSS:Hg 233734.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HSPC068= | ||
| + | |KLHL39= | ||
| + | |ND1= | ||
| + | |NS-1= | ||
| + | |NS1-BP= | ||
| + | |NS1BP= | ||
|all_trans=AL137640:297 | |all_trans=AL137640:297 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=19028 |
| − | |end= | + | |end=189992214 |
| + | |end_of_center_position=189992205 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=ARA3{{!}}FLARA3{{!}}HSPC068{{!}}KLHL39{{!}}ND1{{!}}NS-1{{!}}NS1-BP{{!}}NS1BP |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
|gene_id=10625 | |gene_id=10625 | ||
| − | |gene_name= | + | |gene_name=IVNS1ABP |
|gene_source=HGNC:16951 | |gene_source=HGNC:16951 | ||
|gene_symbol=IVNS1ABP | |gene_symbol=IVNS1ABP | ||
| Line 21: | Line 28: | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=189992194 |
| − | |strand= | + | |start_of_center_position=189992204 |
| − | |tata_box= | + | |strand=+ |
| − | |transcript_name= | + | |tata_box=71(CCATTTATGCAG,+,0.00) |
| + | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233734.1 | |tss_id=hg_233734.1 | ||
Latest revision as of 09:07, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 189992204 |
|---|---|
| End of the center position in the TSS region: | 189992205 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AL137640:297 |
TATA-Box annotation
| Distance to TSS: | 19028 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | IVNS1ABP |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 71(CCATTTATGCAG,+,0.00) |
