Difference between revisions of "TSS:Hg 233771.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ZUBR1= | ||
|all_trans=AK056218:0 BC015865:-14 | |all_trans=AK056218:0 BC015865:-14 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=53440 |
| − | |end= | + | |end=196779200 |
| + | |end_of_center_position=196779200 | ||
|entrez_id=23352 | |entrez_id=23352 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=RBAF600 | + | |gene_alias=RBAF600{{!}}ZUBR1{{!}}p600 |
|gene_description=ubiquitin protein ligase E3 component n-recognin 4 | |gene_description=ubiquitin protein ligase E3 component n-recognin 4 | ||
|gene_id=23352 | |gene_id=23352 | ||
| − | |gene_name= | + | |gene_name=UBR4 |
|gene_source=HGNC:30313 | |gene_source=HGNC:30313 | ||
|gene_symbol=UBR4 | |gene_symbol=UBR4 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_020765 | |nearest_refseq=NM_020765 | ||
|nearest_unigene=Hs.148078 | |nearest_unigene=Hs.148078 | ||
| − | |num_trans= | + | |num_trans=0 |
| + | |p600= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=196779199 |
| − | |strand= | + | |start_of_center_position=196779199 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233771.1 | |tss_id=hg_233771.1 | ||
Latest revision as of 09:08, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 196779199 |
|---|---|
| End of the center position in the TSS region: | 196779200 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AK056218:0 BC015865:-14 |
TATA-Box annotation
| Distance to TSS: | 53440 |
|---|---|
| Nearest PromoterID: | NM_020765 |
| Entrez ID: | 23352 |
| Nearest Unigene: | Hs.148078 |
| Nearest Refseq: | NM_020765 |
| Nearest Ensembl: | ENSG00000127481 |
| Gene Name: | UBR4 |
| Gene Alias: | RBAF600|ZUBR1|p600 |
| Gene Description: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
