Difference between revisions of "TSS:Hg 23451.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK122889:0 AY820969:-24 ENST00000628543.2:-68 uc061pfv.1:-68 |chr=chr2 |cpg_percent=0.015 |distance=0 |distance_to_tss=4983 |end=167135976 |entrez_id=10...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:14303 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=4983 | |distance_to_tss=4983 | ||
|end=167135976 | |end=167135976 | ||
| + | |end_of_center_position=167135973 | ||
|entrez_id=100874011 | |entrez_id=100874011 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_046665 | |nearest_refseq=NR_046665 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=129446 |
|species=human | |species=human | ||
|start=167135968 | |start=167135968 | ||
| + | |start_of_center_position=167135972 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-29(CTTTTAAGAGTC,+,0.00) |
|transcript_name=AK122889 | |transcript_name=AK122889 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 11:55, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 167135972 |
|---|---|
| End of the center position in the TSS region: | 167135973 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK122889 |
|---|---|
| Distance: | 0 |
| Num_trans: | 129446 |
| All_trans: | HGNC:14303 |
TATA-Box annotation
| Distance to TSS: | 4983 |
|---|---|
| Nearest PromoterID: | NR_046665 |
| Entrez ID: | 100874011 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_046665 |
| Nearest Ensembl: | |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | - |
| Gene Description: | XIRP2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -29(CTTTTAAGAGTC,+,0.00) |
