Difference between revisions of "TSS:Hg 23468.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK125495:-176 BX647844:-184 CR627255:295 BC016370:-359 BX647448:-360 AK092683:399 |chr=chr2 |cpg_percent=0.005 |distance=-176 |distance_to_tss=60836 |en...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:14303 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-176 | |distance=-176 | ||
| − | |distance_to_tss= | + | |distance_to_tss=60747 |
|end=167248124 | |end=167248124 | ||
| + | |end_of_center_position=167248119 | ||
|entrez_id=129446 | |entrez_id=129446 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_152381 | |nearest_refseq=NM_152381 | ||
|nearest_unigene=Hs.73680 | |nearest_unigene=Hs.73680 | ||
| − | |num_trans= | + | |num_trans=129446 |
|species=human | |species=human | ||
|start=167248113 | |start=167248113 | ||
| + | |start_of_center_position=167248118 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=12(CACTTGAAAAGC,-,0.00) |
|transcript_name=AK125495 | |transcript_name=AK125495 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 11:59, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 167248118 |
|---|---|
| End of the center position in the TSS region: | 167248119 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK125495 |
|---|---|
| Distance: | -176 |
| Num_trans: | 129446 |
| All_trans: | HGNC:14303 |
TATA-Box annotation
| Distance to TSS: | 60747 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | xin actin binding repeat containing 2 |
| Gene Alias: | CMYA3 |
| Gene Description: | xin actin binding repeat containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 12(CACTTGAAAAGC,-,0.00) |
