Difference between revisions of "TSS:Hg 234970.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000481614.1:137 uc058xpv.1:137 ENST00000474663.5:-171 uc058xpu.1:-171 ENST00000358679.3:185 uc001vkm.3:185 AK054608:185 |chr=chr13 |cpg_percent=0...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:14132 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=25 |
| − | |distance_to_tss= | + | |distance_to_tss=1701 |
| − | |end= | + | |end=99086431 |
| + | |end_of_center_position=99086431 | ||
|entrez_id=122060 | |entrez_id=122060 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
|gene_alias=C13orf32 | |gene_alias=C13orf32 | ||
|gene_description=SLAIN motif family member 1 | |gene_description=SLAIN motif family member 1 | ||
| − | |gene_id= | + | |gene_id=23348 |
| − | |gene_name= | + | |gene_name=dedicator of cytokinesis 9 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:14132 |
| − | |gene_symbol= | + | |gene_symbol=DOCK9 |
| − | |gene_synonyms= | + | |gene_synonyms=KIAA1058 ZIZ1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:14132 |
|nearest_ensembl=ENSG00000139737 | |nearest_ensembl=ENSG00000139737 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242870 |
|nearest_refseq=NM_144595 | |nearest_refseq=NM_144595 | ||
|nearest_unigene=Hs.349955 | |nearest_unigene=Hs.349955 | ||
| − | |num_trans= | + | |num_trans=23348 |
|species=human | |species=human | ||
| − | |start= | + | |start=99086430 |
| − | |strand= | + | |start_of_center_position=99086430 |
| − | |transcript_name= | + | |strand=- |
| − | |tss_classification= | + | |transcript_name=ENST00000652315.1 AF527605 |
| + | |tss_classification=yes | ||
|tss_id=hg_234970.1 | |tss_id=hg_234970.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9BZ29 |
}} | }} | ||
Latest revision as of 12:05, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99086430 |
|---|---|
| End of the center position in the TSS region: | 99086431 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000652315.1 AF527605 |
|---|---|
| Distance: | 25 |
| Num_trans: | 23348 |
| All_trans: | HGNC:14132 |
TATA-Box annotation
| Distance to TSS: | 1701 |
|---|---|
| Nearest PromoterID: | NM_001242870 |
| Entrez ID: | 122060 |
| Nearest Unigene: | Hs.349955 |
| Nearest Refseq: | NM_144595 |
| Nearest Ensembl: | ENSG00000139737 |
| Gene Name: | dedicator of cytokinesis 9 |
| Gene Alias: | C13orf32 |
| Gene Description: | SLAIN motif family member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
