Difference between revisions of "TSS:Hg 236184.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:14466 |
| + | |chr=chr16 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=19 |
|distance_to_tss=46590 | |distance_to_tss=46590 | ||
| − | |end= | + | |end=58464005 |
| + | |end_of_center_position=58464005 | ||
|entrez_id=101927034 | |entrez_id=101927034 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=ROR1 antisense RNA 1 | |gene_description=ROR1 antisense RNA 1 | ||
| − | |gene_name= | + | |gene_id=65009 |
| + | |gene_name=NDRG family member 4 | ||
| + | |gene_source=HGNC:14466 | ||
| + | |gene_symbol=NDRG4 | ||
| + | |gene_synonyms=KIAA1180 SMAP-8 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:14466 | ||
|nearest_ensembl=ENSG00000223949 | |nearest_ensembl=ENSG00000223949 | ||
|nearest_promoter_id=NR_110666 | |nearest_promoter_id=NR_110666 | ||
|nearest_refseq=NR_110665 | |nearest_refseq=NR_110665 | ||
|nearest_unigene=Hs.680824 | |nearest_unigene=Hs.680824 | ||
| − | |num_trans= | + | |num_trans=65009 |
|species=human | |species=human | ||
| − | |start= | + | |start=58464004 |
| − | |strand= | + | |start_of_center_position=58464004 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000394282.8 |
| + | |tss_classification=yes | ||
|tss_id=hg_236184.1 | |tss_id=hg_236184.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q9ULP0 | ||
}} | }} | ||
Latest revision as of 12:32, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58464004 |
|---|---|
| End of the center position in the TSS region: | 58464005 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000394282.8 |
|---|---|
| Distance: | 19 |
| Num_trans: | 65009 |
| All_trans: | HGNC:14466 |
TATA-Box annotation
| Distance to TSS: | 46590 |
|---|---|
| Nearest PromoterID: | NR_110666 |
| Entrez ID: | 101927034 |
| Nearest Unigene: | Hs.680824 |
| Nearest Refseq: | NR_110665 |
| Nearest Ensembl: | ENSG00000223949 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | - |
| Gene Description: | ROR1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
