Difference between revisions of "TSS:Hg 236185.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ACIX= |
| + | |all_trans=NM_001378340:0 NM_022910:0 ENST00000394279.6:21 ENST00000565434.5:-27 ENST00000564486.5:241 NM_001378337:309 NM_001378341:309 NM_001378343:309 CR936733:-396 ENST00000566061.5:-483 AK126574:-483 ENST00000566041.5:-488 ENST00000565430.5:-495 ENST00000567063.5:-495 ENST00000561779.5:-497 ENST00000569578.5:-500 ENST00000421602.6:-500 AK126729:-500 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=362 |
| − | |end= | + | |end=58464801 |
| + | |end_of_center_position=58464801 | ||
|entrez_id=115 | |entrez_id=115 | ||
|gc_percent=0.860697 | |gc_percent=0.860697 | ||
| − | |gene_alias=AC9 | + | |gene_alias=AC9{{!}}ACIX |
|gene_description=adenylate cyclase 9 | |gene_description=adenylate cyclase 9 | ||
| − | |gene_id= | + | |gene_id=65009 |
| − | |gene_name= | + | |gene_name=NDRG family member 4 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:14466 |
| − | |gene_symbol= | + | |gene_symbol=NDRG4 |
| − | |gene_synonyms= | + | |gene_synonyms=KIAA1180 SMAP-8 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:14466 |
|nearest_ensembl=ENSG00000162104 | |nearest_ensembl=ENSG00000162104 | ||
|nearest_promoter_id=NM_001116 | |nearest_promoter_id=NM_001116 | ||
|nearest_refseq=NM_001116 | |nearest_refseq=NM_001116 | ||
|nearest_unigene=Hs.391860 | |nearest_unigene=Hs.391860 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
| − | |start= | + | |start=58464800 |
| − | |strand= | + | |start_of_center_position=58464800 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=NM_022910.4 NM_001378340.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_236185.1 | |tss_id=hg_236185.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9ULP0 |
}} | }} | ||
Latest revision as of 12:32, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 58464800 |
|---|---|
| End of the center position in the TSS region: | 58464801 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_022910.4 NM_001378340.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | NM_001378340:0 NM_022910:0 ENST00000394279.6:21 ENST00000565434.5:-27 ENST00000564486.5:241 NM_001378337:309 NM_001378341:309 NM_001378343:309 CR936733:-396 ENST00000566061.5:-483 AK126574:-483 ENST00000566041.5:-488 ENST00000565430.5:-495 ENST00000567063.5:-495 ENST00000561779.5:-497 ENST00000569578.5:-500 ENST00000421602.6:-500 AK126729:-500 |
TATA-Box annotation
| Distance to TSS: | 362 |
|---|---|
| Nearest PromoterID: | NM_001116 |
| Entrez ID: | 115 |
| Nearest Unigene: | Hs.391860 |
| Nearest Refseq: | NM_001116 |
| Nearest Ensembl: | ENSG00000162104 |
| Gene Name: | NDRG family member 4 |
| Gene Alias: | AC9|ACIX |
| Gene Description: | adenylate cyclase 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
