Difference between revisions of "TSS:Hg 236392.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr16 |cpg_percent=0.02 |distance= |distance_to_tss=94178 |end=74890942 |entrez_id=79726 |gc_percent=0.542289 |gene_alias=CDW12|FP977|p90-120 |gene_descriptio...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |FP977= |
| + | |all_trans=HGNC:30321 | ||
| + | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=10 |
| − | |distance_to_tss= | + | |distance_to_tss=94182 |
| − | |end= | + | |end=17042750 |
| + | |end_of_center_position=17042750 | ||
|entrez_id=79726 | |entrez_id=79726 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=CDW12 | + | |gene_alias=CDW12{{!}}FP977{{!}}p90-120 |
|gene_description=WD repeat domain 59 | |gene_description=WD repeat domain 59 | ||
| − | |gene_name= | + | |gene_id=23164 |
| + | |gene_name=myosin phosphatase Rho interacting protein | ||
| + | |gene_source=HGNC:30321 | ||
| + | |gene_symbol=MPRIP | ||
| + | |gene_synonyms=M-RIP RHOIP3 p116Rip | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30321 | ||
|nearest_ensembl=ENSG00000103091 | |nearest_ensembl=ENSG00000103091 | ||
|nearest_promoter_id=NM_030581 | |nearest_promoter_id=NM_030581 | ||
|nearest_refseq=NM_030581 | |nearest_refseq=NM_030581 | ||
|nearest_unigene=Hs.280951 | |nearest_unigene=Hs.280951 | ||
| − | |num_trans= | + | |num_trans=23164 |
| + | |p90-120= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=17042749 |
| − | |strand= | + | |start_of_center_position=17042749 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 |
| + | |tss_classification=yes | ||
|tss_id=hg_236392.1 | |tss_id=hg_236392.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A8MZF8 Q6WCQ1 | ||
}} | }} | ||
Latest revision as of 12:36, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17042749 |
|---|---|
| End of the center position in the TSS region: | 17042750 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000395806.5 ENST00000395807.2 ENST00000395811.9 |
|---|---|
| Distance: | 10 |
| Num_trans: | 23164 |
| All_trans: | HGNC:30321 |
TATA-Box annotation
| Distance to TSS: | 94182 |
|---|---|
| Nearest PromoterID: | NM_030581 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | CDW12|FP977|p90-120 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
