Difference between revisions of "TSS:Hg 236985.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_024447:-145 AK094860:176 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-145 |
|distance_to_tss=3492 | |distance_to_tss=3492 | ||
| − | |end= | + | |end=8360396 |
| + | |end_of_center_position=8360396 | ||
|entrez_id=85001 | |entrez_id=85001 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized protein MGC16275 | |gene_description=uncharacterized protein MGC16275 | ||
| − | |gene_name= | + | |gene_id=100128288 |
| + | |gene_name=uncharacterized LOC100128288 | ||
| + | |gene_source=EntrezGene:100128288 | ||
| + | |gene_symbol=LOC100128288 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000246731 | |nearest_ensembl=ENSG00000246731 | ||
|nearest_promoter_id=NR_026914 | |nearest_promoter_id=NR_026914 | ||
|nearest_refseq=NM_032915 | |nearest_refseq=NM_032915 | ||
|nearest_unigene=Hs.706954 | |nearest_unigene=Hs.706954 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
| − | |start= | + | |start=8360395 |
| + | |start_of_center_position=8360395 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_024447.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_236985.1 | |tss_id=hg_236985.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:49, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 8360395 |
|---|---|
| End of the center position in the TSS region: | 8360396 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_024447.1 |
|---|---|
| Distance: | -145 |
| Num_trans: | 2 |
| All_trans: | NR_024447:-145 AK094860:176 |
TATA-Box annotation
| Distance to TSS: | 3492 |
|---|---|
| Nearest PromoterID: | NR_026914 |
| Entrez ID: | 85001 |
| Nearest Unigene: | Hs.706954 |
| Nearest Refseq: | NM_032915 |
| Nearest Ensembl: | ENSG00000246731 |
| Gene Name: | uncharacterized LOC100128288 |
| Gene Alias: | - |
| Gene Description: | uncharacterized protein MGC16275 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
