Difference between revisions of "TSS:Hg 240853.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000296577.8:18 uc003ijy.4:18 NM_002940:90 NM_001040876:90 ENST00000502586.5:374 uc062zyr.1:374 ENST00000502803.5:397 ENST00000507193.5:397 uc062zy...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |OABP= |
| + | |RLI= | ||
| + | |RLI1= | ||
| + | |RNASEL1= | ||
| + | |RNASELI= | ||
| + | |RNS4I= | ||
| + | |all_trans=HGNC:34343 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=237 |
| − | |distance_to_tss= | + | |distance_to_tss=282 |
| − | |end= | + | |end=76213803 |
| − | |entrez_id= | + | |end_of_center_position=76213801 |
| + | |entrez_id=10393 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias= | + | |gene_alias=APC10{{!}}DOC1 |
| − | |gene_description= | + | |gene_description=anaphase promoting complex subunit 10 |
| − | |gene_id= | + | |gene_id=100129583 |
| − | |gene_name= | + | |gene_name=family with sequence similarity 47 member E |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:34343 |
| − | |gene_symbol= | + | |gene_symbol=FAM47E |
| − | |gene_synonyms= | + | |gene_synonyms=FLJ42946 LOC100129583 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:34343 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000164162 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001256706 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_014885 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.480876 |
| − | |num_trans= | + | |num_trans=100129583 |
|species=human | |species=human | ||
| − | |start= | + | |start=76213798 |
| + | |start_of_center_position=76213800 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000510197.5 AK124936 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_240853.1 | |tss_id=hg_240853.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6ZV65 |
}} | }} | ||
Latest revision as of 14:13, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76213800 |
|---|---|
| End of the center position in the TSS region: | 76213801 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000510197.5 AK124936 |
|---|---|
| Distance: | 237 |
| Num_trans: | 100129583 |
| All_trans: | HGNC:34343 |
TATA-Box annotation
| Distance to TSS: | 282 |
|---|---|
| Nearest PromoterID: | NM_001256706 |
| Entrez ID: | 10393 |
| Nearest Unigene: | Hs.480876 |
| Nearest Refseq: | NM_014885 |
| Nearest Ensembl: | ENSG00000164162 |
| Gene Name: | family with sequence similarity 47 member E |
| Gene Alias: | APC10|DOC1 |
| Gene Description: | anaphase promoting complex subunit 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
