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Difference between revisions of "TSS:Hg 114451.1"

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(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=18 |entrez_id=51338 |gc_percent=0.427861 |gene_alias=4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7 |gene_description=membrane spann...")
 
 
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{{TSSDetail
 
{{TSSDetail
 +
|CD20-L1=
 +
|CD20L1=
 +
|HDCME31P=
 +
|MS4A4=
 +
|MS4A7=
 +
|all_trans=HGNC:13371
 +
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
|distance_to_tss=18
+
|distance=0
 +
|distance_to_tss=-107
 +
|end=60280564
 +
|end_of_center_position=60280559
 
|entrez_id=51338
 
|entrez_id=51338
 
|gc_percent=0.427861
 
|gc_percent=0.427861
|gene_alias=4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7
+
|gene_alias=4SPAN1{{!}}CD20-L1{{!}}CD20L1{{!}}HDCME31P{{!}}MS4A4{{!}}MS4A7
 
|gene_description=membrane spanning 4-domains A4A
 
|gene_description=membrane spanning 4-domains A4A
|gene_name=MS4A4A
+
|gene_id=51338
 +
|gene_name=membrane spanning 4-domains A4A
 +
|gene_source=HGNC:13371
 +
|gene_symbol=MS4A4A
 +
|gene_synonyms=CD20L1 MS4A7
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:13371
 
|nearest_ensembl=ENSG00000110079
 
|nearest_ensembl=ENSG00000110079
 
|nearest_promoter_id=NM_001243266
 
|nearest_promoter_id=NM_001243266
 
|nearest_refseq=NM_024021
 
|nearest_refseq=NM_024021
 
|nearest_unigene=Hs.325960
 
|nearest_unigene=Hs.325960
|tata_box="-53(CGATATAAAAGA,-,0.00)"
+
|num_trans=51338
 +
|species=human
 +
|start=60280553
 +
|start_of_center_position=60280558
 +
|strand=+
 +
|tata_box=-53(CGATATAAAAGA,-,0.00)
 +
|transcript_name=ENST00000529991.2
 +
|tss_classification=yes
 
|tss_id=hg_114451.1
 
|tss_id=hg_114451.1
 +
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Latest revision as of 22:46, 19 July 2021

Basic information about the TSS


TSS ID:hg_114451.1
Species:human
Chr:chr11
TSS Classification:yes
Start:60280553
End:60280564
Strand:+
TSS Score:1
Start of the center position in the TSS region:60280558
End of the center position in the TSS region:60280559



Gene and protein annotation


Transcript_name:ENST00000529991.2
Distance:0
GeneID:51338
HGNC/MGI_ID:HGNC:13371
UniProt_ID:
Gene_name:membrane spanning 4-domains A4A
Gene_symbol:MS4A4A
Gene_synonyms:CD20L1 MS4A7
Gene_source:HGNC:13371



Transcript annotation


Transcript_name:ENST00000529991.2
Distance:0
Num_trans:51338
All_trans:HGNC:13371



TATA-Box annotation


Distance to TSS:-107
Nearest PromoterID:NM_001243266
Entrez ID:51338
Nearest Unigene:Hs.325960
Nearest Refseq:NM_024021
Nearest Ensembl:ENSG00000110079
Gene Name:membrane spanning 4-domains A4A
Gene Alias:4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7
Gene Description:membrane spanning 4-domains A4A
Gene Type:protein-coding
CpG%:0.01
GC%:0.427861
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-53(CGATATAAAAGA,-,0.00)