Difference between revisions of "TSS:Hg 242192.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:3490 |
| + | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-154 |
|distance_to_tss=-275 | |distance_to_tss=-275 | ||
| − | |end= | + | |end=13991095 |
| + | |end_of_center_position=13991095 | ||
|entrez_id=102465668 | |entrez_id=102465668 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=hsa-mir-7111 | |gene_alias=hsa-mir-7111 | ||
|gene_description=microRNA 7111 | |gene_description=microRNA 7111 | ||
| − | |gene_name= | + | |gene_id=2115 |
| + | |gene_name=ETS variant transcription factor 1 | ||
| + | |gene_source=HGNC:3490 | ||
| + | |gene_symbol=ETV1 | ||
| + | |gene_synonyms=ER81 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:3490 | ||
|nearest_ensembl=ENSG00000276712 | |nearest_ensembl=ENSG00000276712 | ||
|nearest_promoter_id=NR_106961 | |nearest_promoter_id=NR_106961 | ||
|nearest_refseq=NR_106961 | |nearest_refseq=NR_106961 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=2115 |
|species=human | |species=human | ||
| − | |start= | + | |start=13991094 |
| + | |start_of_center_position=13991094 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000403685.5 X87175 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242192.1 | |tss_id=hg_242192.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P50549 | ||
}} | }} | ||
Latest revision as of 14:42, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 13991094 |
|---|---|
| End of the center position in the TSS region: | 13991095 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000403685.5 X87175 |
|---|---|
| Distance: | -154 |
| Num_trans: | 2115 |
| All_trans: | HGNC:3490 |
TATA-Box annotation
| Distance to TSS: | -275 |
|---|---|
| Nearest PromoterID: | NR_106961 |
| Entrez ID: | 102465668 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106961 |
| Nearest Ensembl: | ENSG00000276712 |
| Gene Name: | ETS variant transcription factor 1 |
| Gene Alias: | hsa-mir-7111 |
| Gene Description: | microRNA 7111 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
