Difference between revisions of "TSS:Hg 242723.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:29789 |
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=-1 |
| − | |distance_to_tss= | + | |distance_to_tss=115 |
| − | |end= | + | |end=17800876 |
| + | |end_of_center_position=17800876 | ||
|entrez_id=80028 | |entrez_id=80028 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=Fbl18 | |gene_alias=Fbl18 | ||
|gene_description=F-box and leucine rich repeat protein 18 | |gene_description=F-box and leucine rich repeat protein 18 | ||
| − | |gene_id= | + | |gene_id=57509 |
| − | |gene_name= | + | |gene_name=microtubule associated scaffold protein 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:29789 |
| − | |gene_symbol= | + | |gene_symbol=MTUS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ATBP ATIP1 ATIP3 DKFZp586D1519 FLJ14295 ICIS KIAA1288 MP44 MTSG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:29789 |
|nearest_ensembl=ENSG00000155034 | |nearest_ensembl=ENSG00000155034 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321213 |
|nearest_refseq=NM_024963 | |nearest_refseq=NM_024963 | ||
|nearest_unigene=Hs.623974 | |nearest_unigene=Hs.623974 | ||
| − | |num_trans= | + | |num_trans=57509 |
|species=human | |species=human | ||
| − | |start= | + | |start=17800875 |
| + | |start_of_center_position=17800875 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AY363099 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242723.1 | |tss_id=hg_242723.1 | ||
Latest revision as of 14:53, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17800875 |
|---|---|
| End of the center position in the TSS region: | 17800876 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY363099 |
|---|---|
| Distance: | -1 |
| Num_trans: | 57509 |
| All_trans: | HGNC:29789 |
TATA-Box annotation
| Distance to TSS: | 115 |
|---|---|
| Nearest PromoterID: | NM_001321213 |
| Entrez ID: | 80028 |
| Nearest Unigene: | Hs.623974 |
| Nearest Refseq: | NM_024963 |
| Nearest Ensembl: | ENSG00000155034 |
| Gene Name: | microtubule associated scaffold protein 1 |
| Gene Alias: | Fbl18 |
| Gene Description: | F-box and leucine rich repeat protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
