Difference between revisions of "TSS:Hg 243505.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 NM_001080515:-33 uc011mdm.2:-33 BC146961:-33 BC146946:-33 |chr=chr9 |cpg_perce...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 NM_001080515:-33 uc011mdm.2:-33 BC146961:-33 BC146946:-33 | |all_trans=BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 NM_001080515:-33 uc011mdm.2:-33 BC146961:-33 BC146946:-33 | ||
| − | |chr= | + | |chr=chrM |
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=33 | |distance_to_tss=33 | ||
| − | |end= | + | |end=2141 |
| + | |end_of_center_position=2140 | ||
|entrez_id=642968 | |entrez_id=642968 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| Line 11: | Line 12: | ||
|gene_description=family with sequence similarity 163 member B | |gene_description=family with sequence similarity 163 member B | ||
|gene_id=642968 | |gene_id=642968 | ||
| − | |gene_name= | + | |gene_name=FAM163B |
|gene_source=HGNC:33277 | |gene_source=HGNC:33277 | ||
|gene_symbol=FAM163B | |gene_symbol=FAM163B | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001080515 | |nearest_refseq=NM_001080515 | ||
|nearest_unigene=Hs.173134 | |nearest_unigene=Hs.173134 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=2138 |
| + | |start_of_center_position=2139 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243505.1 | |tss_id=hg_243505.1 | ||
Latest revision as of 12:52, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 2139 |
|---|---|
| End of the center position in the TSS region: | 2140 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BC152887:-10 BC156625:-10 BC156836:-10 AB528863:-10 ENST00000356873.7:-33 NM_001080515:-33 uc011mdm.2:-33 BC146961:-33 BC146946:-33 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001080515 |
| Entrez ID: | 642968 |
| Nearest Unigene: | Hs.173134 |
| Nearest Refseq: | NM_001080515 |
| Nearest Ensembl: | ENSG00000196990 |
| Gene Name: | FAM163B |
| Gene Alias: | C9orf166 |
| Gene Description: | family with sequence similarity 163 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
