Difference between revisions of "TSS:Hg 4.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000457540.1:-459 |chr=chr1 |cpg_percent=0.015 |distance=-459 |distance_to_tss=-1092 |end=630103 |entrez_id=101928626 |gc_percent=0.447761 |gene_al...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:42129 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-1092 | |distance_to_tss=-1092 | ||
|end=630103 | |end=630103 | ||
| + | |end_of_center_position=630101 | ||
|entrez_id=101928626 | |entrez_id=101928626 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 11: | Line 12: | ||
|gene_description=uncharacterized LOC101928626 | |gene_description=uncharacterized LOC101928626 | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=MT-ND2 pseudogene 28 |
|gene_source=HGNC:42129 | |gene_source=HGNC:42129 | ||
|gene_symbol=MTND2P28 | |gene_symbol=MTND2P28 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_125957 | |nearest_refseq=NR_125957 | ||
|nearest_unigene=Hs.637667 | |nearest_unigene=Hs.637667 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=630098 | |start=630098 | ||
| + | |start_of_center_position=630100 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000457540.1 | |transcript_name=ENST00000457540.1 | ||
Latest revision as of 21:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 630100 |
|---|---|
| End of the center position in the TSS region: | 630101 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000457540.1 |
|---|---|
| Distance: | -459 |
| Num_trans: | |
| All_trans: | HGNC:42129 |
TATA-Box annotation
| Distance to TSS: | -1092 |
|---|---|
| Nearest PromoterID: | NR_125957 |
| Entrez ID: | 101928626 |
| Nearest Unigene: | Hs.637667 |
| Nearest Refseq: | NR_125957 |
| Nearest Ensembl: | ENSG00000230021 |
| Gene Name: | MT-ND2 pseudogene 28 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928626 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
